SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_014498537.1.85912 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_014498537.1.85912
Domain Number - Region: 48-85
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.00122
Family Pan module (APPLE domain) 0.04
Further Details:      
 
Domain Number - Region: 132-185
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.00216
Family Pan module (APPLE domain) 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_014498537.1.85912
Sequence length 188
Comment hypothetical protein [Bradyrhizobium japonicum]; AA=GCF_000472745.1; RF=na; TAX=1079467; STAX=375; NAME=Bradyrhizobium japonicum USDA 38; strain=USDA 38; AL=Scaffold; RT=Major
Sequence
MGKGRLRGAVMANVVACATLLLLVFASVPARAQTAFDRPGGDYFSSPVTSGDPEDCALLC
ERDRRCRSWSFSYPDVEGGSAVCWLKNTVPPRVPGSCCISGVRGAGVIEPRIEGVETSID
RPGGDLRNFEIKDGEGEEACKAACIADNKCRAFTYSRPGYTGREARCFLKKEIKPPRRKA
GFTSGVVR
Download sequence
Identical sequences A0A0A3XV48 G7DMB7
gi|384222383|ref|YP_005613549.1| WP_014498537.1.18950 WP_014498537.1.35620 WP_014498537.1.56529 WP_014498537.1.64673 WP_014498537.1.67973 WP_014498537.1.6944 WP_014498537.1.77977 WP_014498537.1.85912 WP_014498537.1.97209

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]