SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_047618224.1.61275 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_047618224.1.61275
Domain Number 1 Region: 1359-1609
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 5.16e-46
Family Complement components 0.0066
Further Details:      
 
Domain Number 2 Region: 146-258
Classification Level Classification E-value
Superfamily TPR-like 0.00000276
Family Tetratricopeptide repeat (TPR) 0.012
Further Details:      
 
Domain Number 3 Region: 36-82
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0000053
Family Hairpin loop containing domain 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_047618224.1.61275
Sequence length 1822
Comment membrane protein [Rhizobium leguminosarum]; AA=GCF_000799985.1; RF=na; TAX=384; STAX=384; NAME=Rhizobium leguminosarum; strain=OV152; AL=Scaffold; RT=Major
Sequence
MSVRSFFAFATIAFSTIAISFSAAAADTKRDIQTIKDADFFGFDLRTEQNVSLDQCKTSC
IGDKSCKAFTYNPKVKWCFLKSDFKTMNAFPGAIAGKIVETAGQQERDIGAAPRLTFLTN
DLIQQAHDFKDNLTLADDQQGQGADSLTANARIDLTANNLADALKSFHGALSITPDDADL
WLETARAAASLGTAESGTSGQAVLDALNGYELTRTKPKRAEALAVLADALDRNANYRPAL
DAYKASLALVASDDVQAAYLQLKSTQGFRITEHTVDADSATPRACVTFSEALVKTTDYTP
FVTLNGEAPKALETKDKQICVEGLTHGQTYKIGFRTGLPSSVDEALEAAVSIDVYIKDRS
QMVRFTGDSFVLPSTARRGIPIVSVNMTSANLKLYRIGDRAIAPLLTNSQFLSQLDGYSA
QNIQDQSGELVWQGSIDIANELNKDIVTSFPVDEALPERKPGIYVMTATAANGPAQEWDS
QATQWFLVSDIGVTTYAGTDGLNVFARSLASAKPIAGVELQLLAKNNEVLGTATTDENGR
ATFTAGLIRGTAALTPAVITAKNGTSDYVFLDMTRAGFDLSDRGVTGRAAPGAIDVLTFT
ERGIYRAGETVHAQALARDTDGNAIENLPLTFIFSRPDGVEDRRIVSQTSNLGGYSIDFP
TQENAMRGTWTMNIYTDPKGSAIATKSFLVDDFVPDRTDMEIKTEAKEVGPDTPATITVS
GKYLYGAPAAGLTLEGDVVVKPTRESAAYKGFLFGLADEEASEDSRLPIDGLPELDENGE
ASTDLTISDLPATTQLLNATVYMRMQEAGGRAIERSLTIPVKNQGASIGVKPEFSDDLPE
NSIANFTVISVKADGQKQETKGLRWKFYSLNREYQWYREGTAWKYEPVYTAEQVSNGSVD
ATMDGGKISVPVTWGRYRLEVESPDADGPTSSVEFDAGWFVTSTSTETPDGLEIALDKDS
YKIGDTAKLKVTSRYGGELMVTAGTEKLVAVQNATIGETGGEVDIPVTSDWGAGAYVTAT
LFRPGDAQDSHMPMRSIGIKWLKVDPEQRALQVTLDTPEKMLPRGPLNIGLQVAGAGANE
DAYVTVAAVDVGILNLTRYEPPNPEDWYFGQRQLGLEIRDLYGRLIDGSLGATGKLRTGG
DGGAIALQASPPTQKLVAFFSGPVKLDAEGKANVSFDIPQFNGTARVMAVAWSKSGVGHG
VKDVIIRDPVVVTASLPKFLSPGDKANLRLDIANTDAPAGDYKLQLTGNDAVGIEKASAS
QTIRLEAGAKSELTLSLIGKQPGAGSVSINLSDASGLSLDQTVDVPVRPASLPITERRVL
ALKPGAKLTVDKNLLADSVLPGASISVNVTRSAAFDIPALLMTLDRYPFGCAEQTTSRAL
PLLYLAEVAKQAGMENDDDVHKRVQDAIYRVLSYQASAGSFGLWGPDSGDVWLDSYVTDF
LTRAREMKYDVPERAFVQALENLQNTLSYTTDIKGQGDQIAYAIYVLARNKKAAISDLRY
YADTMINDFPTPLAKAHIAAALALYGDAQRSKNIFLDALQMSEQSMVSRVNLSRTDYGTI
LRDGAAILALAAESRPVPPVIPELAKAVGKEWERSKYKSTQEETWMLLAARAIQGGDDGL
KVDVNGAAHTGAYMARMTGDALADHPLTLTNQTNDTVSAVVTTVAAPTVPLPAGGDGFII
ERTYYTLDGEEANVSEAKQNERYVVVIHVRETNDWPSRIVITDLLPAGFEIDNPNLVDSA
QMTNFDWIGEISAAHTEFRYDRFVAAFNRAAGDEREFNVAYVVRAVTPGTYDHPAANVED
MYRPELSARTATGKMEVVTAQQ
Download sequence
Identical sequences WP_047618224.1.61275

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