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Domain assignment for XP_001901049.1.25112 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_001901049.1.25112
Domain Number 1 Region: 121-238
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.83e-33
Family Calponin-homology domain, CH-domain 0.0000324
Further Details:      
 
Domain Number 2 Region: 1509-1680
Classification Level Classification E-value
Superfamily Plakin repeat 4.58e-26
Family Plakin repeat 0.0037
Further Details:      
 
Domain Number 3 Region: 1710-1878
Classification Level Classification E-value
Superfamily Plakin repeat 8.9e-22
Family Plakin repeat 0.0095
Further Details:      
 
Domain Number 4 Region: 2763-2907
Classification Level Classification E-value
Superfamily Plakin repeat 8.37e-20
Family Plakin repeat 0.0035
Further Details:      
 
Domain Number 5 Region: 2464-2620
Classification Level Classification E-value
Superfamily Plakin repeat 7.24e-19
Family Plakin repeat 0.0058
Further Details:      
 
Domain Number 6 Region: 245-356
Classification Level Classification E-value
Superfamily Spectrin repeat 1.31e-17
Family Spectrin repeat 0.0022
Further Details:      
 
Domain Number 7 Region: 641-763
Classification Level Classification E-value
Superfamily Spectrin repeat 1.36e-16
Family Spectrin repeat 0.0087
Further Details:      
 
Domain Number 8 Region: 1114-1235,1268-1293
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000587
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 9 Region: 555-683
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000012
Family Spectrin repeat 0.0042
Further Details:      
 
Domain Number 10 Region: 2066-2118,2170-2258
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000000000000235
Family Plakin repeat 0.01
Further Details:      
 
Domain Number 11 Region: 1910-2045
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000000000000541
Family Plakin repeat 0.013
Further Details:      
 
Domain Number 12 Region: 2330-2412
Classification Level Classification E-value
Superfamily Plakin repeat 0.00000000667
Family Plakin repeat 0.023
Further Details:      
 
Domain Number 13 Region: 943-1041
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000196
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 14 Region: 494-586
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000273
Family Spectrin repeat 0.0065
Further Details:      
 
Domain Number 15 Region: 2919-2972
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000432
Family Plakin repeat 0.013
Further Details:      
 
Weak hits

Sequence:  XP_001901049.1.25112
Domain Number - Region: 1057-1149
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0288
Family Spectrin repeat 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_001901049.1.25112
Sequence length 2973
Comment VAB-10A protein [Brugia malayi]; AA=GCF_000002995.3; RF=representative genome; TAX=6279; STAX=6279; NAME=Brugia malayi; AL=Scaffold; RT=Major
Sequence
MYKVLRSYTKKAERKHELTRSTANTTEKVNGYSVTDGTASSPIYNITPSYGIGVGTIEDV
RNGQVVPIDKNGHIEAAWPGGQAFSESSSYEAREHFERKVQRVKKTRGERDSNRKSKKSK
VSEVLSSIDGTSARDALLQWAQDVTRGYPGVNVRNFTSSWRDGLAFNAILHRYRPNLIQW
SKIIGEGVSARDRLNNAFAAAESEFGVSRLLDAEDVDVDVPDEKSIITYVSSLYNALPHT
SELSRYEDVMYEYEREAAEWLHWVERAIRLMDDRQLPTNLVELRRLEHDLERFKSEDLSP
KAREKQRLADHYAELHQLFECTEHLHIPTELSTQNLDQSWQRLLQSLSERFSLIEEQVGV
QGSTTDIISRLARGIGITNEKLDHILNRIEDAESRIDTLRPADLQRLIDGIIDDLIALEA
PISGFFEDVDQLKRLRHSEANDYYQQVYGLEQRRQAYLSRMRTQFVTRLGIRTEQLMREN
EQRRESIRRTTYGRVEDCIQWVRSRLEKLSAMEFVEDLEQLEGMFEEHKVDNHEIQDFRQ
NVDECIARQAEISAEDTHEYCELLSILESEYQQLRDLSAGRMLDLDTLIAFIRGAQHEIV
WINEREDIEVSRNWSDIKQLDLPMLQNYYKQLLHEIELREPRFNDVHNKGAALLNQGHPA
IHVIEFYLNAMQRKWDWLLALSKCLEQHLRDALNLNSFMEDANTAEEWMIKQSEMLERKY
SRSEFSLEEGEQMLRELDEISELIKKYHSILMTLTERSSQIPPLWQRGERTQRPISIIAL
ADYTDKDITIREGDECILTDNSDLIHWNIRGPGGSEVLIPSVMFRILPPDARITTYLNRL
HTSLEKLRRLLGQKHRMVRYNMVLNTMTQIRSWNLNTFAAMTPEERDTIIKALNDDVHKL
LSELESNDPLAMRLKEELKLTNEHFYDLLNQMNRPKEPEVGAQFDAKITELLGKLDEAYR
NLNDRVMQNIPRSREELENLTIEHKEFEDGLQTLDVDVSTVNELFRQILEPTPSQRANFD
HLSGRWEDLWELSRMYVERLKSLEAVLNGLIEVADIVRQHEILLSSFDDMPASLEKLRGV
HSQLLELNMVLQQQQTIVDAVNRNIALLRQHVSRTRQSPNHPDVDRLEDEVQTSTVRWEN
VCSQVVDRLKTAEHALQTQMVYRTEYENEIRWLDSVETTINSLRKPEELHPEQYQQQLDQ
LIAEYSQLQERTEAVENVNREGGKFIREAKGYDNRLIQYMENVMNIHGPDSRNSFRRSIP
QPKNGVQQVTEELEHLNRRFAQLSSLILERRNIMQVLIQNWKRKKQEEGERRRAEEEEKR
RQFEAARLKALEDADRLRKQRKAAEDARRAAEEADRLRREREAAEDACRRAEDEARRRME
EDARRRAAEDAARQKAEQAERERKRKEDGDRRRREEEERRRRVDEAERERERKRLDDERR
RAEEDRRRQEEHEQRLREEERRYREKEQKPKMPNLSHGIQQAIVSEGGELEEFEESQNVP
ERATIAEHEDEMQMYQEETITKTQFYEMEGILHKQTGEILTFVEAIRQGLLDLHSGGGEF
YDIVSGARISLEKAAELGYIDGGFHEVLNTHYGIRHPETGESLSLLEAIQIGLYDPDIRQ
LRDIETADILPMYDCISRGIITLDTQHRLVKMGVLKLPPLSLESAIEQGVVNKETGCFTG
KYTKETMPLKDALYNGYIQIGGCRPHTMIAITLSDCLETGLIDGYTGEFVDKHSSEKITL
REAVSKQYALLNLHVPEIVKTDENRRITLGEAIVRNAVNTRQGNFNDFLKNQTLTLQEAF
LRDLIQKPLTLTEISQKDLIDSTNKFIDGGTRGRFTLLEAIAVGLLDPDVRHIVDPDEKD
VISIAEALERGLLEPDGRIILHKQQKVFSVNEAVSDGLLIRRVRHSIFNVKGIKNTKTGE
NLTFNEAVDRGVIILQAERIVDLAANESFLIADCADKDLLDPMLFELLTTSLGIRNGPKQ
DMTVIRAVAKEFIDPKKGIYVDKRSNRELSPKQAYDDGLLTLKGALQLSAMLDIHPSLVT
PIKKIDHKKRIRRPGQKEGVTTDEVKVTLAEAMRQGLVDSRTHRFRQGDTEMSFEEALRQ
GLIHPSDEWIVPSKTGAGPTVEEKITESVTETAQQLAPKFYPDKNIEETVTTVKKVRKTE
TTALGGPGGVSVYRAVTGSKDSFEIPANGYHILEAERKDYVNLKTGTVSIPNLSRSLTLQ
EAFQLGVLDSRSITVVDPSTGSHVPIAEAMNKKTIDKNGCMERNGQMIDFETLINNKIVL
VEAEPPVGLGSSTKKVIQFSPGSEAIISFHPIGTPTVEETEQSWTFDSGRGELVDHITGE
RLTLDAALAFGKIGREDLRVFDTLTAREMSFEEAEKWGVIDEKDRYYLDKRENKRYSLTQ
AALQHRVFPTGGVPENASDAIHTTYKIQKRSELSKKEALFGGPAEYAEQTLTKVLNSDWY
NAQSGKFTDPQTQKQMSLKESIIKGLFNPYDTIVLDKHRMRELSFLEAIDENIINDTEGT
VLDTETGKFVDLKTAHLQGLLKSKGLSHSLEEALVSGKLDLCTGQVTTADGGSVKVEDAI
AAKLIDSQSIIFRDPSTGEELSYNTAVENKIIDPIKGIVYIKNMTEIMTFPQALTSGVLI
GSGSRPFTPQKPHSTRLVERKLQFTPYAPEPTKKSAVAVMEQRTLGSGRQEIVDLGGGKH
VMVKVVRGEGGVERGEYVDPSSGMKFTIQLHGDPYMTEAKTVVKSTAQVQSIQLEPHAEF
VGIDKIRDKRNGRVMSLQDAQRIGIARIDKKGKQMTKTYSVFRSNIQNAVTRGVIDARGE
KLSLEDAVRAKLVDLQNLTYLNPKTGDALTLAQAANMGLVDVTLSETLPKGVSHPANGER
ISVQRAIELGVINPKTGEVKNPFTNEKLAWLDIMKPVYTSLTMEGVYDPTKGYGVPVLTA
LTEGLIDASTGQYSNIITAEIITLKDASNKGLD
Download sequence
Identical sequences XP_001901049.1.25112

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