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Domain assignment for XP_002122591.2.78797 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002122591.2.78797
Domain Number 1 Region: 446-732
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 5.54e-67
Family Eukaryotic proteases 0.00027
Further Details:      
 
Domain Number 2 Region: 108-149
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000249
Family TSP-1 type 1 repeat 0.0027
Further Details:      
 
Domain Number 3 Region: 154-186
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000419
Family TSP-1 type 1 repeat 0.0028
Further Details:      
 
Domain Number 4 Region: 283-343
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000183
Family TSP-1 type 1 repeat 0.0018
Further Details:      
 
Domain Number 5 Region: 239-288
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000222
Family TSP-1 type 1 repeat 0.0018
Further Details:      
 
Domain Number 6 Region: 343-387
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000497
Family TSP-1 type 1 repeat 0.0021
Further Details:      
 
Domain Number 7 Region: 46-98
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000432
Family TSP-1 type 1 repeat 0.0028
Further Details:      
 
Domain Number 8 Region: 392-447
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000889
Family TSP-1 type 1 repeat 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002122591.2.78797
Sequence length 737
Comment PREDICTED: SCO-spondin [Ciona intestinalis]; AA=GCF_000224145.2; RF=representative genome; TAX=7719; STAX=7719; NAME=Ciona intestinalis; AL=Chromosome; RT=Major
Sequence
MNLLVMITIFCVVKTIRGISMQKMTSQTFERQEKRFVRSLVNQARLLSDWTEWSTCNATV
CGIVGVQERYRNCSIAGEISVHLTICGQELYQAKPCEMPCITNQPVSLSSWSNWGSCSVS
CGRGGVQIRQRDCLQIPCTERFLQQRSCIGQNTCPQWSQWQEWSECSKSCGMGGVKIRER
SCQVRRNTRVAQVVVSDVLKRVSSPRQSSIQNVNASLCEGGNEGTEDAFPCMTSTSCRRN
WSSWQPWNGCSTTCGMGFSAGRRVCLGSIGSSCLGRPARYRRCYSPPCWSSWSMYTPCSI
SCGAGAGYRTRRRECRGTSTRVPQYMTCRGSNTERELCNTETCPRWGQWSRFNRCSKTCD
GGKKMRTRKCERGICRGRKTDVVTCNYQRCPYWSQWSSYTCCSVTCGANGIKERTRVCRH
GGYRRAPFMNSCVGEWREQTNCSMHPCNVTPPSVFDTFECGIRNRRQTNNLSSSLLRIFG
GQQSGPHGWPWQASWQHKNCNRCSWSHSCGATLVAPGWVIIAAHCIEEASQPMNHDNPGD
LWSIVVGMHRLSEDGERYFIRRAIVHPNYIYRDVTDADIALVELRSEVPLTTEVVPVCLP
QFSQPLVNETCFITGWGFTGPASSVSARLSPTLLEAEVPIMNFTACQMLSPIYQELLNST
NHMCAGDPVTAATDTCLGDSGGPLTCQRLDNTWYISGVTSFSFVECGTPGHVGIYTPLIS
FEEWIRTTIENNTNAAC
Download sequence
Identical sequences A0A1W2W9P2
XP_002122591.2.78797

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