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Domain assignment for XP_002507833.1.63511 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002507833.1.63511
Domain Number 1 Region: 812-986
Classification Level Classification E-value
Superfamily UBC-like 3.62e-33
Family UBC-related 0.0013
Further Details:      
 
Domain Number 2 Region: 2133-2192
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000101
Family Eukaryotic type KH-domain (KH-domain type I) 0.0037
Further Details:      
 
Domain Number 3 Region: 1808-1861
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000351
Family Eukaryotic type KH-domain (KH-domain type I) 0.0039
Further Details:      
 
Domain Number 4 Region: 174-299
Classification Level Classification E-value
Superfamily UBC-like 0.0000000226
Family UBC-related 0.002
Further Details:      
 
Domain Number 5 Region: 1458-1598
Classification Level Classification E-value
Superfamily Plus3-like 0.00000549
Family Plus3 0.0036
Further Details:      
 
Weak hits

Sequence:  XP_002507833.1.63511
Domain Number - Region: 1986-2045
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.000902
Family Eukaryotic type KH-domain (KH-domain type I) 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_002507833.1.63511
Sequence length 2328
Comment predicted protein [Micromonas commoda]; AA=GCF_000090985.2; RF=representative genome; TAX=296587; STAX=296587; NAME=Micromonas commoda; strain=RCC299; AL=Complete Genome; RT=Major
Sequence
MSDDDRDETAIARLNAEVADRAGSLTLKNAVVAIGRVFDCEEDARRVVEACIDAPGDDKV
VGGGDDDDAGRVSAAGGSDASTAGDDDDDDDHYAYSDEDDSDADGAKTGVDASVPGELNS
DQLTRLYQNKRKCVEREERRVAQKTANEGANGGAGEETWDMKAAARNQIFSSKGAFTRLS
TELFALQERMDPELAVDAVDHDVYVWDVKFMGGFDPGSGLAEDLETLEAVNGYGYVQLRL
HFMADLYPFYPPRVELVRPKLAGIIPGAMTAHPRLHLRNWQPFRPIKSVVEHLRAFLQKF
ARVDLASELNEIERFPDGAYVDSVSRLELALARLAACGTSCGGPLIPSRYNEMYEEEIRL
ETESGATRRGYEEEFGRDDADIVDFARVLQDGAGGAAGGVGGKDGKGGKDGGGTPGSRDG
KGAGPGPGSTGKIKLKSSSEAKADKRKEYWAKGTGYGHDTPRRAGKDDGDAGSQTWDAAA
ARGAQAAEDQSVLTLLVEATRFIEALPLNPSGKPGKTRKRVTNAGDDADAAPPTLTDAEA
SRADVLIRASSLPQFLARELKNCSFMNMTARSAYYSSLMRTARALAESRCADCLLIDGAA
GQGHASALVKTLEDAAVQAKIYLKSVDECEVAALATATASLPSPSKESLGTLGSNDESGP
NTARHGLKSPVMAKPGGVRSPVASSLLNVAEKEERRRAKQREAIASEVALARLILDAGES
VSAAAHALGFASGASGGGGGGEGGVSTRGKGKGKGKGKKGGGGGGGEGDDDAAAEEEAYQ
SALRPFTYDSAELLAAGHAYAGEARVDLRSGPHISRVAKEIAGLAGGALPLNRSSSAFVR
VDDAKSVIWSIMITGPEDTPYDGGCFVFDAFFPSGYPTHAPKIQFKTTGGGRWRANPNLY
KDGKVCLSLLGTWQGGKGETWDPAVSTMLQVIVSIQSLILCPRPYFNEPGFERLIGTPEG
RSKSDQYDAAVVENTLRWAMIESLKKPHPAFKDVIMAHFRLRKGHLLGPVRARWTEGATG
ELARVAKQIREDAMADDDVRKFDPDRTVLARGLPLATSTAKSVTSMFTTAGKVSRVAVGS
EEQRDKGTFAVAAIEFATPPNKSLLDSMEGMDVPGGHPAGLKFIDWDVKKHFKLFGKKQR
GAVAEAGRAAAKVELAAGSSEPEDQQRGDATGWAAVDPEPEPDVPVSVRLAREEEERKKE
EEERKKEEEERAAQLAAAQADAEDDLISLGGDESDHFDEDGDKSRSDTPEPRDDDDDDDD
VRHVEPEGHRRRDDDDDDDDDDKEDRRPSNKRVASRSRSASRDRPPPQNARRFSNGGDWN
NAPPSGPHGPHGRGMEPMRRGRSPPPQREFRDRRDSRGAPPTHGGRHSGWDDRGGRGGPQ
PRGYPPRSPPRDFRDGRRGGPPPGRGEWDRGMDRDRGMDRDRGMDRDRDRFELPDRARPL
PRSPARAPPPLDLNATATLEEATTVFLSRSRIHQLCCVGVDGPGTGSGKDVDRALDALRA
ARGAIVRVGVGGGRYQVGELAGGALAPLADADAETGPTHPVLRLIDERDQVAERAHSLGV
ISNSAPTRVEWDAYVAACRNGGMPPPRVGDVNAVRAALDRVFRVGEQVGFGAFANNPRGR
SPPPRERGRSPPREPLDRRNRHSPPREFGRAPAPRGRRDGGPRSRSPPPRDRGPGPGAIP
EFNHRGAAARERDSGWDRRGGGRGGDPTAMAPFDRPPRRDGSRDFDRPPRGDSRDRGPGP
VEPAPFQPGGDRRRARSPSRDARGGSRDRSPSRSVRARLGGFADGPPATLDHDPAGAEWL
VDTRGNNGLVVGPAGSQVKKIEHATSAKVSAERDGTTVVIVGRVPDVERARDMIEDLLAK
NGIDFRGKPGRGFPLDRGGPRVVADRPRDGEPNNPGGDLRGLLKRKSLDADTPAPKAKKG
PAAAQDPAWMAEELDKMRARAERFGLPAPTMDDVRAKHASDGDDKGDKGDKGDASADEDL
VPVADKMMMSRVIGKKRQTMAMLCKIADVKMFIAQKDMAVRVKCADSNRRAHAVALVRAV
VSNEIGTKITFQILSAAFDAIVAGEPIPPPDPANEIAAKSKDAAKGGVLARLQGGVDEDE
DGNDDDDGNDDGDEGDAKDVAAGRFRRTVDTRGLVGVIIGKNGSTIKRLERVTRTKMEVD
QDTKSVTVRSKTEKAVERGCELVETVLASCEKSKSERTEGQRGPLLKDILAGAIARWNGE
KGEAPPAEVSPEGTEVKETVEAPPDAAAEDPAGASVESDEAEKPAEENAEENAEENAEEN
AEADAKQEDTQEAEDEEKKPATRGGRGRGRGAAKGGRGRGRGRGRGKK
Download sequence
Identical sequences C1FFI6
jgi|MicpuN2|101773|fgenesh2_pg.C_Chr_08000064 XP_002507833.1.63511

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