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Domain assignment for XP_002862866.1.15461 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_002862866.1.15461
Domain Number 1 Region: 76-180
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 6.41e-27
Family alpha-D-mannose-specific plant lectins 0.0041
Further Details:      
 
Weak hits

Sequence:  XP_002862866.1.15461
Domain Number - Region: 344-413
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.00243
Family Hairpin loop containing domain 0.071
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_002862866.1.15461
Sequence length 430
Comment hypothetical protein ARALYDRAFT_333188 [Arabidopsis lyrata subsp. lyrata]; AA=GCF_000004255.2; RF=representative genome; TAX=81972; STAX=59689; NAME=Arabidopsis lyrata subsp. lyrata; AL=Scaffold; RT=Minor
Sequence
MRTSNYGYNTFLIFLVFLEVSSSSSTYSSVSTSEKRTVSFNETIVSPGNVYELGLLPTDL
NWYLGIWHKEDIFKQFIWVANRDKPFSISTGTLKFSENNLVLSDKDNSHVWSANMNRGGV
RSPMVAELLDNGNFVVKDSNNDEVLWQTFDYPTDTLLPEMKLGRDKKTGINKVLTSWHPD
DPSRIGYSLQVKNQAGLFELSVCGQDTSKCFYRSDPWDGRRFGDIPLDFSLNYVSPNWTR
NVEDSNFTFLMTGQNNNSILTMEGRLPQILTWEPERMMWSLSWHPLDFYSKYQICGPNSY
SSRTTTFSVCTCIKGFDPAFHENWSLRDWRGGCERTTRLNCTGDHFLQLKNMKLPDTKDV
TVDMVIGKKNCEKRCLRDCDCTAYAYVTILKGHAGCVMWTGALNDFQNYSVGGRDLYVKV
AAAIDHGNTA
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Identical sequences D7MWF8
XP_002862866.1.15461 59689.fgenesh1_pm.C_scaffold_113000001 jgi|Araly1|333188|fgenesh1_pm.C_scaffold_113000001

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