SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003222399.1.98722 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003222399.1.98722
Domain Number 1 Region: 365-494
Classification Level Classification E-value
Superfamily C-type lectin-like 1.4e-41
Family C-type lectin domain 0.000073
Further Details:      
 
Domain Number 2 Region: 224-358
Classification Level Classification E-value
Superfamily C-type lectin-like 2.16e-37
Family C-type lectin domain 0.00041
Further Details:      
 
Domain Number 3 Region: 812-946
Classification Level Classification E-value
Superfamily C-type lectin-like 3.54e-34
Family C-type lectin domain 0.00031
Further Details:      
 
Domain Number 4 Region: 950-1099
Classification Level Classification E-value
Superfamily C-type lectin-like 2.98e-32
Family C-type lectin domain 0.0011
Further Details:      
 
Domain Number 5 Region: 505-640
Classification Level Classification E-value
Superfamily C-type lectin-like 2.32e-31
Family C-type lectin domain 0.0014
Further Details:      
 
Domain Number 6 Region: 645-797
Classification Level Classification E-value
Superfamily C-type lectin-like 1.12e-28
Family C-type lectin domain 0.0008
Further Details:      
 
Domain Number 7 Region: 1113-1243
Classification Level Classification E-value
Superfamily C-type lectin-like 7.42e-28
Family C-type lectin domain 0.001
Further Details:      
 
Domain Number 8 Region: 1238-1377
Classification Level Classification E-value
Superfamily C-type lectin-like 4.98e-24
Family C-type lectin domain 0.0022
Further Details:      
 
Domain Number 9 Region: 27-161
Classification Level Classification E-value
Superfamily Ricin B-like lectins 1.29e-20
Family Cysteine rich domain 0.002
Further Details:      
 
Domain Number 10 Region: 161-219
Classification Level Classification E-value
Superfamily Kringle-like 1.97e-20
Family Fibronectin type II module 0.00085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003222399.1.98722
Sequence length 1460
Comment PREDICTED: C-type mannose receptor 2 [Anolis carolinensis]; AA=GCF_000090745.1; RF=representative genome; TAX=28377; STAX=28377; NAME=Anolis carolinensis; AL=Chromosome; RT=Major
Sequence
MDPATFFRLALGILVALEVGLCALPSDPGVFLIYSSGLQGCLEAKDSLVKIARICNTSLP
AQKWKWVSRNRLFNIGTMQCLGVSWKSANTSTAAHALATYECDRESITMRWNCRTLGDQL
SQYLSSRLGNWTLTPAERGDQARGGQWKIYNHDEDLCSRPYSEIYTIQGNSHGKPCTIPF
KYDNQWFYDCTSMGRGDGHLWCATTQDYGKDERWGFCPIKSNDCDTFWDRDQLTSSCYQF
NFQSTLSWQEAGKSCEQQGANLLSITEIHEQTYINGLLTGYGSTLWIGLNDLDLNGGWQW
SDNSPLKYLNWESDQPDNPNEENCGVIRTESSGGWQNRDCSMALPYICKKKPNATLNTYS
VETELKVDCDPSWQPFQTNCYRLISEKKSWLDAKKTCLRSEGDLVSIHTLSELEFVTKQI
KQDVEELWIGLNDLRLQMNFEWSDGTPVQFTFWHPFEPNNFRDSLEDCVTIWGPEGRWND
SPCNQTLPSVCKKRGRVSQGREDEDHGCRKGWKWHSPSCYWLGVDHVVYSEARKMCMDYG
STLVTITNRFEQAYVSSLIYGWEDEYFWTALQDINETGSFHWLSGDEVTYTHWNRNQPGY
NKGGCVALATGSAMGLWEVKNCINFKAKYICRQTLGTPVNPELPPPLPTPSLTATCPAGW
SSNPKLRHCYKVFSYDKLQEKKSWVMAQLYCKDLKAQLLSLGSYEEEHFVANTLNKIFGE
SEPEIHEQHWFWIGLNRRDPGSERSWRWSDGLGFSYHNFDRSNHDDDDIRNCVALDLASL
QWMPLQCEVQLDWICKLPKGTEIKEPETTIQGSNEWVKYQDAEYKFFDHHSTWVQAQRIC
TWFQAELVSVHSQAELNFLGQNLKKFSRGQEQHWWIGLNTYENDGRFRWSDDSPLNFILW
APGKPRPTSKEKKCVYMTASREDWGDQKCLTDLPYICKRSNRTTLPSVPVPTPGSCAQGW
HELSNKCFRIHSQEQVIWPEAKRKCEIQGGMLATVSNHLEQAFITTLLPNITCDLWIGFH
DAKKEFQWVESELVQYVNWAPGEPSGYKTSTASDNPTNCAIVWHGYPSLFTGRWDDRNCL
EEKHGFICQRSKDPTLSPSPATFSPAPNATLSYLNCTYRILKKPLKWHDAVLLCESLNAS
LVNVMEPYTQAYLTQAISSVRAPLWIGLSKEEARRSYVWFTEESLSYTNWQDGEPQQLIG
CTYMDVDGTWRTASCDSKLQGAICKMNAGPVSSHKWSYNGSCPKSVEDSSWIPFRNHCYA
FHMEAVIGQKEAMKRCQKVGGSVLSILDEIENVFIWEHLEYSGGQSKGAWLGMAFNPKGG
TLVWHDNMAVNYSNWGQHDTGPSMLSPNSCYWIQKSNGVWHLGSCSNVTMGVICKTARGK
QASFSSAAFLENTKAIAVVILSSLALCALIAIAIYLYKRRWSSERGTFESARYSRTNSSP
SESAEKNILVSDMEMNEQQD
Download sequence
Identical sequences XP_003222399.1.98722

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]