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Domain assignment for XP_003374346.1.5133 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_003374346.1.5133
Domain Number 1 Region: 71-173
Classification Level Classification E-value
Superfamily Second domain of FERM 0.0000464
Family Second domain of FERM 0.018
Further Details:      
 
Domain Number 2 Region: 185-251
Classification Level Classification E-value
Superfamily PH domain-like 0.0000861
Family Third domain of FERM 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_003374346.1.5133
Sequence length 420
Comment conserved hypothetical protein [Trichinella spiralis]; AA=GCF_000181795.1; RF=representative genome; TAX=6334; STAX=6334; NAME=Trichinella spiralis; strain=ISS 195; AL=Scaffold; RT=Major
Sequence
MPIKSSTTGKELLAAALAKLQLPKYDIFVLVDKQRRPLKMNVAVRKQVARNDPTLKMITL
YHSTELDETLMLNDAFVAIQYVEAIENLICGKIILSYENLIQLIAIAIHQSFLAPSGSKW
RNIPRIHWLRKRFRVSRKKWMSDVNEKFHEHKFNDNIQAMKCFLAHAKNAGTFSNQLLFI
ASNYALIGMNRKGIHFYIENNYEAYINWSQLISVKQNKRKVTVKYVEKQKLTVRIMFKSR
GDAKSFVKFCKIIQKVEHVDAAFYSFNPINDQLESSSAESELWSKCNNLFQDVNPLNGEK
SFFNEKNCGSNKKARTMKKTHTDLEERQEANKTKEHLRIIREVIYLQDYLLRRIALLRAS
FNRQKHYVSLNTAYQTYKSQFNEFKTNVIPHYTKKMSKGKYECKKEYGGEIESNGEKHDS
Download sequence
Identical sequences E5SP24
XP_003374346.1.5133 EFV53471

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