SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_003999386.1.62641 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_003999386.1.62641
Domain Number 1 Region: 54-523
Classification Level Classification E-value
Superfamily Sema domain 7.72e-129
Family Sema domain 0.0000227
Further Details:      
 
Domain Number 2 Region: 1365-1494,1690-1878
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 4.32e-51
Family p120GAP domain-like 0.035
Further Details:      
 
Domain Number 3 Region: 966-1055
Classification Level Classification E-value
Superfamily E set domains 1.27e-18
Family Other IPT/TIG domains 0.086
Further Details:      
 
Domain Number 4 Region: 1054-1157
Classification Level Classification E-value
Superfamily E set domains 4.58e-16
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.052
Further Details:      
 
Domain Number 5 Region: 870-967
Classification Level Classification E-value
Superfamily E set domains 0.00000000000204
Family Other IPT/TIG domains 0.015
Further Details:      
 
Domain Number 6 Region: 526-577
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000327
Family Plexin repeat 0.0016
Further Details:      
 
Domain Number 7 Region: 1154-1235
Classification Level Classification E-value
Superfamily E set domains 0.0000000798
Family E-set domains of sugar-utilizing enzymes 0.044
Further Details:      
 
Domain Number 8 Region: 822-856
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000366
Family Plexin repeat 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_003999386.1.62641
Sequence length 1911
Comment PREDICTED: plexin-A2 isoform X1 [Felis catus]; AA=GCF_000181335.2; RF=representative genome; TAX=9685; STAX=9685; NAME=Felis catus; breed=Abyssinian; AL=Chromosome; RT=Major
Sequence
MRTRRICVLVPAPLRMEQRRPWPRAAEVDRWSVVLLSVVWVLLAPGAAGMPQFSTFHSEN
RDWTFNHLTVHRGTGAVYVGAINRVYKLTGNLTIQVAHKTGPEEDNKSCYPPLIVQPCSE
VLTLTNNVNKLLIIDYSENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNKT
GTMYGVIVRSDGEDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSL
IKIPSDTLALVSHFDIFYIYGFASGGFVYFLTVQPETPEGVAINSAGDLFYTSRIVRLCK
DDPKFHSYVSLPFGCTRAGVEYRLLQAAYLAKPGDSLAQAFNISGQDDVLFAIFSKGQKQ
YHHPPDDSALCAFPIRAINRQIKERLQSCYQGEGNLELNWLLGKDVQCTKAPVPIDDNFC
GLDINQPLGGSTPVEGLTLYTTSRDRMTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPH
GGVQYEMVSVLKDGSPILRDMAFSIDQRYLYIMSERQITRVPVESCEQYTTCGECLSSGD
PHCGWCALHNMCSRRDKCQRAWEPNRFAASISQCMSLEVHPSSISVSEHSRLLSLVVSDA
PDLSAGISCAFGNLTEVDGQVSGSQVICISPGPKDVPVIPLDQDWFGLELQLRSKETGKM
FVSTEFKFYNCSAHQLCLSCVNSAFRCHWCKYRNLCTHDPTTCSFQEGRINISEDCPQLV
PTEEILIPVGEVKPITLKARNLPQPQSGQRGYECVLNIQGAVHRVPALRFNSSSVQCQNS
SYQYDGMDISNLAVDFAVVWNGNFIIDNPQDLKVHLYKCAAQRESCGLCLKADRKFECGW
CSGERRCTLQPHCASLSSPWLDWSSHNVKCSNPQITEILTVSGPPEGGTRVTIHGVNLGL
DFSEIAHHVQVAGVPCTPLPGDYIIAEQIVCEMGHALVGTTSGPVRLCIGECKPEFMTKS
HQQYTFVNPSVLSLNPIRGPESGGTMVTITGHYLGAGSSVAVYLGNQTCEFYGRSMNEIV
CVSPPSSNGLGPVPVSVSVDRARVDNNLQFEYIDDPRVQRIEPEWSIASGHTPLTITGFN
LDVIQEPRVRVKFNGKESVNVCKVVNTTTLTCLAPSLTTDYRPGLDTVERPDEFGFVFNN
VQSLLIYNDTKFIYYPNPTFELLSPTGVLDQKPGSPIILKGKNLCPPASGGAKLNYTVLI
GETPCAVTVSETQLLCEPPNLTGQHKVMVHVGGMVFSPGSVSVISDSLLTLPAIVSIAAG
GSLLLIIVIIVLIAYKRKSRENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTS
DLDRSGIPYLDYRTYAMRVLFPGIEDHPVLRELEVQGNGQQHVEKALKLFAQLINNKVFL
LTFIRTLELQRSFSMRDRGNVASLIMTGLQGRLEYATDVLKQLLSDLIEKNLENKNHPKL
LLRRTESVAEKMLTNWFAFLLHKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSL
SEDKLIRQQIEYKTLILNCVNPDNENSPEIPVKVLNCDTITQVKEKILDAVYKNVPYSQR
PRAVDMDLEWRQGRIARVVLQDEDITTKIEGDWKRLNTLMHYQVSDRSVVALVPKQTSSY
NIPASASISRTSISRYDSSFRYTGSPDSLRSRAPMITPDLESGVKVWHLVKNHDHGDQKE
GDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETLFSTVHRGSALPLAIKYMFDFLDEQAD
RHGIHDTDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQTFMDSCSTS
EHRLGKDSPSNKLLYAKDIPSYKSWVERYYADIAKLPAISDQDMNAYLAEQSRLHAVEFN
MLSALNEIYSYVSKYSEELLGALEQDEQARRQRLAYKVEQLINAMSLSIES
Download sequence
Identical sequences A0A2I2UUB4
XP_003999386.1.62641

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]