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  Home > Genomes > NCBI 2017_08 genome > XP_004004959.1.66739

Domain assignment for XP_004004959.1.66739 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  XP_004004959.1.66739
Domain Number 1 Region: 1450-1635
Classification Level Classification E-value
Superfamily Fibronectin type III 7.46e-30
Family Fibronectin type III 0.0000485
Further Details:      
 
Domain Number 2 Region: 1726-1893
Classification Level Classification E-value
Superfamily Fibronectin type III 1.44e-27
Family Fibronectin type III 0.00000981
Further Details:      
 
Domain Number 3 Region: 909-1078
Classification Level Classification E-value
Superfamily Fibronectin type III 1.17e-25
Family Fibronectin type III 0.00062
Further Details:      
 
Domain Number 4 Region: 1270-1440
Classification Level Classification E-value
Superfamily Fibronectin type III 9.58e-23
Family Fibronectin type III 0.0000187
Further Details:      
 
Domain Number 5 Region: 727-892
Classification Level Classification E-value
Superfamily Fibronectin type III 1.14e-22
Family Fibronectin type III 0.00075
Further Details:      
 
Domain Number 6 Region: 409-464
Classification Level Classification E-value
Superfamily Kringle-like 5.71e-21
Family Fibronectin type II module 0.0000527
Further Details:      
 
Domain Number 7 Region: 349-404
Classification Level Classification E-value
Superfamily Kringle-like 1.4e-20
Family Fibronectin type II module 0.0000586
Further Details:      
 
Domain Number 8 Region: 1631-1721
Classification Level Classification E-value
Superfamily Fibronectin type III 4.24e-19
Family Fibronectin type III 0.00000438
Further Details:      
 
Domain Number 9 Region: 1174-1262
Classification Level Classification E-value
Superfamily Fibronectin type III 4.56e-17
Family Fibronectin type III 0.0000028
Further Details:      
 
Domain Number 10 Region: 558-604
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000000864
Family Fibronectin type I module 0.0018
Further Details:      
 
Domain Number 11 Region: 2040-2083
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000000157
Family Fibronectin type I module 0.0016
Further Details:      
 
Domain Number 12 Region: 516-560
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000000262
Family Fibronectin type I module 0.0045
Further Details:      
 
Domain Number 13 Region: 619-701
Classification Level Classification E-value
Superfamily Fibronectin type III 0.0000000000000279
Family Fibronectin type III 0.00000576
Further Details:      
 
Domain Number 14 Region: 231-275
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000102
Family Fibronectin type I module 0.0001
Further Details:      
 
Domain Number 15 Region: 468-509
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000144
Family Fibronectin type I module 0.002
Further Details:      
 
Domain Number 16 Region: 94-139
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000249
Family Fibronectin type I module 0.00012
Further Details:      
 
Domain Number 17 Region: 1995-2038
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000523
Family Fibronectin type I module 0.0034
Further Details:      
 
Domain Number 18 Region: 185-230
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000746
Family Fibronectin type I module 0.00016
Further Details:      
 
Domain Number 19 Region: 50-91
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000144
Family Fibronectin type I module 0.00019
Further Details:      
 
Domain Number 20 Region: 142-182
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000301
Family Fibronectin type I module 0.00018
Further Details:      
 
Domain Number 21 Region: 2083-2124
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000131
Family Fibronectin type I module 0.0026
Further Details:      
 
Domain Number 22 Region: 307-345
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000105
Family Fibronectin type I module 0.0003
Further Details:      
 
Domain Number 23 Region: 1910-1972
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000292
Family Fibronectin type III 0.0032
Further Details:      
 
Domain Number 24 Region: 1095-1181
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000526
Family Fibronectin type III 0.002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004004959.1.66739
Sequence length 2177
Comment PREDICTED: fibronectin isoform X11 [Ovis aries]; AA=GCF_000298735.2; RF=representative genome; TAX=9940; STAX=9940; NAME=Ovis aries; breed=Texel; AL=Chromosome; RT=Major
Sequence 
MLGGPGPGLLLLLAVLSLGTAVPSAGASKSRRQAQQIVQPQSPLTVSQSKPGCYDNGKHY
QINQQWERTYLGSALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEKCFDQAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTRTS
YRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLQTTSAGSGSFTDIRPAIYQPQPH
PQPPPYGHCVTDSGVVYSVGMQWLKTQGNKQMLCTCLGNGVSCQETAITQTYGGNSNGEP
CVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGNSNGAL
CHFPFLYNNRNYTDCTSEGRRDNMKWCGTTQNYDADQKFGFCPMAAHEEICTTNEGVMYR
IGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDGITYNVNDTFHKRHEEGH
MLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYLQGVRYQCYCYGRGIGEWAC
QPLQTYPDASGPVQVIITETPSQPNSHPIQWNAPESSHISKYILRWKPKNSPNRWKEATI
PGHLNSYTIKGLRPGVVYEGQLISVQHYGQREVTRFDFTTTSTSPAVTSNTVTGETTPLT
PVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPD
LLPGRKYTVNVYEISEEGEQNLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRPRAPIT
GYRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFIQQETT
GVPRSDKVPPPRDLQFVEVTDVKITIMWTPPESPVTGYRVDVIPVNLPGEHGQRLPVSRN
TFAEVTGLSPGVTYHFKVFAVNQGRESKPLTAQQATKLDAPTNLQFINETDTTVIVTWTP
PRARIVGYRLTVGLTRGGQPKQYNVGPAASQYPLRNLQPGSEYAVSLVAVKGNQQSPRVT
GVFTTLQPLGSIPPYNTEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSESGSIV
VSGLTPGVEYVYTISVLRDGQERDAPIVKKVVTPLSPPTNLHLEANPDTGVLTVSWERST
TPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDKESVPI
SDTIIPAVPPPTDLRFTNVGPDTMRVTWAPPSSIELTNLLVRYSPVKNEEDVAELSISPS
DNAVVLTNLLPGTEYLVSVSSVYEQHESIPLRGRQKTALDSPSGIDFSDITANSFTVHWI
APRATITGYRIRHHPEHMGGRPREDRVPPSRNSITLTNLNPGTEYVVSIVALNSKEESQP
LVGQQSTVSDVPRDLEVIAATPTSLLISWDAPAVTVRYYRITYGETGGSSPVQDFTVPGS
KSTATISGLKPGVDYTITVYAVTGRGDSPASSKPVSINYRTEIDKPSQMQVTDVQDNSIS
VRWLPSSSPVTGYRVTTAPKNGPGPSKTKTVGPDQTEMTIEGLQPTVEYVVSVYAQNQNG
ESQPLVQTAVTTIPAPTNLKFTQVTPTSLTAQWTAPNVQLTGYRVRVTPKEKTGPMKEIN
LAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVITTLENISPPRRARVTDATETT
ITISWRTKTETITGFQVDAIPANGQTPIQRTIRPDVRSYTITGLQPGTDYKIHLYTLNDN
ARSSPVVIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVVP
RPRPGVTEATITGLEPGTEYTIQVIALKNNQKSEPLIGRKKTGQEALSQTTISWTPFQES
SEYIISCHPVGVDEEPLQFRVPGTSASATLTGLTRGATYNIIVEAVKDQQRQKVREEVVT
VGNSVDQGLSQPTDDSCFDPYTVSHYAVGEEWERLSDSGFKLSCQCLGFGSGHFRCDSSK
WCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPHEATCYDDGKTYHVGEQWQ
KEYLGAICSCTCFGGQRGWRCDNCRRPGAEPGNEGSTAHSYNQYSQRYHQRTNTNVNCPI
ECFMPLDVQADTEDSRE
Download sequence
Identical sequences XP_004004959.1.66739

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.