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Domain assignment for XP_004686270.1.23501 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004686270.1.23501
Domain Number 1 Region: 426-482
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), beta-barrel domain 2.88e-21
Family Transcription factor IIA (TFIIA), beta-barrel domain 0.00011
Further Details:      
 
Domain Number 2 Region: 5-47
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 0.0000000000000837
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.00055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004686270.1.23501
Sequence length 482
Comment PREDICTED: TFIIA-alpha and beta-like factor isoform X1 [Condylura cristata]; AA=GCF_000260355.1; RF=representative genome; TAX=143302; STAX=143302; NAME=Condylura cristata; AL=Scaffold; RT=Major
Sequence
MACVNPVPKLYKSVIEDVIDGVRDLFAEEGIEEQVLKDLKQLWEAKVLQSKATEDFFRNS
ITSPLFTLQLPHSLHQTLQSSTASLVFPAGRTLSSFTTTELGASNSSANFAFPGYPIHVP
AGVTLQTTSGHLYKVSVPIMVTQTSGRANVLQHPVQQVFQHFGQPSVIQTSIPQCQPVLT
SCSLQATTEKSQRMETMLQQPTILYSGKVDRKHLENTTSDILIPPGNEHKIMCEALLSPP
KSSQFISLPGVAFPPQVSQIDCNMEPVLSVPAGMTQNLHRGPLSMDPQAAVHQHMSDVQL
RGLKNRIFECDAIKQPRNIEKPSGLPDSEKDSNSHMDLNIQVTDDDINEIIQIDGTGDTS
SNTETGSTRGISENEFLGTVAAGSLKVLEEEADSISNEDSTVNSSDNEDPQIDFVDEDPL
NSGDDVSEQDVPDLFDTDNVIVCQYDKIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDA
EW
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Identical sequences XP_004686270.1.23501

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