SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_004743016.1.14098 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_004743016.1.14098
Domain Number 1 Region: 44-201
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 2.02e-29
Family Calponin-homology domain, CH-domain 0.0018
Further Details:      
 
Domain Number 2 Region: 214-292
Classification Level Classification E-value
Superfamily GAS2 domain-like 8.5e-28
Family GAS2 domain 0.0000353
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_004743016.1.14098
Sequence length 689
Comment PREDICTED: GAS2-like protein 3 [Mustela putorius furo]; AA=GCF_000215625.1; RF=representative genome; TAX=9669; STAX=9668; NAME=Mustela putorius furo; breed=Sable; AL=Scaffold; RT=Major
Sequence
MIMQPATQVWFGEDLPLSPRSPLTPRHGPGLADVCQYDEWIAVRHEATLLPMQEDLSIWL
SGLLGIEVKAERLLEELDNGVLLCQLIDVLQSMVKTFESGEPRNFPMGKVPCKKDAASGS
FFARDNTANFLYWCRHIGVDETYLFESEGLVLHKDPRQVYLCLLEIGRIVSRYGVEPPVL
VKLEKEIELEETLLNTSGPEDSISIPKSCCQHEELHEAVKHIAEDPPCSCSHRFSIEYLS
EGRYRLGDKILFIRMLHGKHVMVRVGGGWDTLQGFLLKYDPCRILQFATLEQKILAFQKG
VSNENVPDSSARTPQPPEMNPLSAVNMFQKQKSKPGTPVGIPRSKEKQVRPLDGLLPASS
LKGGNLGSVSVRSKLLDSPASSSHLKLKSSKGITKKPQAPSIKAVGKSTSSPASSRTTPC
ESQSLRKLISSHDTSQANLVMAQKPRDVPESALVPNKSSGKTEPKHLKHTLKSSRDNAES
PSAAHSDSSSKHPKPPMANIHVRPKPSPSLHSPAKITKSSSKTIPTSLGTRSQPSDRAPQ
AGAMPAHKLKSALNLNQPLSVSSVVPTKTAQESKDKNMVSVAKKQPQNKSPSQKIGPSSL
KSPGRTPLSLMSLPQSSVKTQPVSKSAQMATKSQYSAKGPPKSGKAPAATRKPPSSGKEA
VSGDKKPTTKKKEDDDHYFVMTGSKKPRK
Download sequence
Identical sequences XP_004743016.1.14098 XP_004743017.1.14098 XP_012906966.1.14098

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]