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Domain assignment for XP_004864893.1.39548 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_004864893.1.39548
Domain Number 1 Region: 1656-1755
Classification Level Classification E-value
Superfamily Plakin repeat 3.01e-19
Family Plakin repeat 0.0076
Further Details:      
 
Domain Number 2 Region: 268-393
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000152
Family Spectrin repeat 0.0084
Further Details:      
 
Domain Number 3 Region: 678-804,834-861
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000302
Family Spectrin repeat 0.008
Further Details:      
 
Domain Number 4 Region: 141-212
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000851
Family Spectrin repeat 0.007
Further Details:      
 
Domain Number 5 Region: 569-705
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00004
Family Spectrin repeat 0.0076
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_004864893.1.39548
Sequence length 1756
Comment PREDICTED: periplakin [Heterocephalus glaber]; AA=GCF_000247695.1; RF=representative genome; TAX=10181; STAX=10181; NAME=Heterocephalus glaber; AL=Scaffold; RT=Major
Sequence
MNSLFRKRNKGKYSPTVQTRSISNKELSELIEQLQKNADQVERNIVDTEAKMQSDVTRLQ
GGQQPEHRDVALQKVSDSEKLLYVLEADSAITKHMKHPQGDMIAEDIRQLKERVANLRGK
HKQVYSLVVKEISPQVNWAALVEEKLDKLSSQSFGTDLPLVDSQVEQHNIFHNEVKAIGP
HLAKNGDKEQDSELQAKYQKLLAASQARQQHLSSLQDYMQRCTNELYWLDKQAKGRIQYD
WSDRNLDYPSRRRQYENFIHRNLEAKEERINKLHREGDQLLVAEHPGKNSIEAHMEAVHA
DWKEYLNLLICEESHLKFMEDYHQFHKDVKDAQELLRKVDSDLDQKYSPDFKDRYQIEVL
LQELDDQEKALDKYQDVVQGLQKRGQQVVPLKYRRETPLKPVPVEALCDFEDDQGPISRG
YSYTLQKNNGESWELTDSTGNKLTAPAVCFMIPPTDPEALALVDSLGSQYCSVRQKAAGS
KHTLQQRHEVLKAENPGDASDLQGRQLLAGLDKVVSNLDRQEKAITGILRPPLEQGRAVQ
DSADRAKDLKNITNELLWIESEKVRSTAECEAFVQALPDSGTAPLLRTRVEDTNRKYEHL
AQLLDSAQEKIDAANRLEKSLQQGRELLASHENRLTQDDTVPESSSVVDGKRQELEAMAS
ELQAQKFLLGEVEQNLQAAKQCSNSLASQFQEHCPDLERQEAEVHKLGQRFDNLRQQLER
RAQSLQSARAAYDEYQRDYDRMLQFLSNIPSYEPQETDSLSQVETKLKNQKNLLDEIANR
GQEVQKVYANSQQYQQAVKDYELEAEKLRSLLDLENGRNSHMSKRARLQSPAGKVKEEEA
ALAAKFTEVNAINKQRLQNLEFALNLLRQQPEADMTHETLQRSKLGSGVDEVWKIRKELD
EESERRQQLENEVKSTQEEIWTLQHQGPQESLVIKEVRKKVPDPALEESFQQLQRTLAEE
QHKNQLLQEELEALQLQLHALEQETRDGGQEYVVKEVLRIEPDRTQAEEVLQLQEELETL
RRQKGAREAEVLLLQQRIAALAAEKSQVQEKVTEKEVVKLQNDPQLEAEYGRLQEQQQRE
STLREKQEEELSFLQAKLRRLEKERAMAEGKITVKEVLKVEKDTATEREVSNLTHQYEDE
AAKARASHRAKTELLRKIWALEEENAKVVVQEKVREIVRPDPKAESEVANLRLELVEQER
KYRGAEEQLKSYQSELEALRKRGPQVEVKEVTKEVIKYTTDPETEKELQRLREEIVDKTR
LIERCDLEIYQLKQEIQSLKDAKPQVQTREVVQEILQFHEDPQTKEEVGSLRAKLSEEQK
KQVDLERERASQEEKIDCKEKELLQGKERVVRQEVVQYEEEPGLQAEVSSFTDSIDAELR
QIDKLRSELRQLQRRRGELERQLEELELERQARRAAELEVQRLQQRLATLEREEAEAGEK
VTRKQKVVLQQDPQQTREHARLRAQLEEEQHRRQLLEGELEPLRRKLATLEKAEVKEKVV
FSESIQVEKGDTEQEIQKLKKSLEEETRSKRELDAEVTSLEAKLSELEFYNSKSSKELDF
LREENHKLQLERQNLQMETRRLRSEIKMAATETQDLRNTTTMDSGANLDSRLWSLERELD
DLKRLSRDKDLEIDELQKRLGSVAVKREQRENHLRRSIVVIDPDTGRELSPEEAHRAGLI
DWNMFVKLSSQECDWEEISVKGPSGESSVIHDRKSGKKFSIEEALQSGRLTPAQYDRYVN
KDMSIQELAVLVSGQK
Download sequence
Identical sequences A0A0P6J803
XP_004864893.1.39548

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