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Domain assignment for XP_005388374.1.28644 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005388374.1.28644
Domain Number 1 Region: 464-662
Classification Level Classification E-value
Superfamily Hemopexin-like domain 7.2e-69
Family Hemopexin-like domain 0.00000000205
Further Details:      
 
Domain Number 2 Region: 89-218,391-446
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.24e-36
Family Matrix metalloproteases, catalytic domain 0.000000678
Further Details:      
 
Domain Number 3 Region: 277-334
Classification Level Classification E-value
Superfamily Kringle-like 2.14e-21
Family Fibronectin type II module 0.0000617
Further Details:      
 
Domain Number 4 Region: 337-393
Classification Level Classification E-value
Superfamily Kringle-like 4e-20
Family Fibronectin type II module 0.0000818
Further Details:      
 
Domain Number 5 Region: 221-276
Classification Level Classification E-value
Superfamily Kringle-like 6.85e-20
Family Fibronectin type II module 0.0000577
Further Details:      
 
Domain Number 6 Region: 42-107
Classification Level Classification E-value
Superfamily PGBD-like 1.08e-19
Family MMP N-terminal domain 0.000025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_005388374.1.28644
Sequence length 662
Comment PREDICTED: 72 kDa type IV collagenase [Chinchilla lanigera]; AA=GCF_000276665.1; RF=representative genome; TAX=34839; STAX=34839; NAME=Chinchilla lanigera; AL=Scaffold; RT=Major
Sequence
MRARGAWGTVAGPLRALCVLSCLLPRAAAAPSPIIKFPGDVAPKTDKELAVQYLNTFYGC
PKDSCNLFVLKDTLKKMQKFFGLPETGELDQNTIETMRKPRCGNPDVANYNFFPRKPKWD
KNQISYRILGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPGPGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFN
GREYTSCTDAGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNADGQPCKFPFRFQGT
SYNSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVVPFTFLGNKH
ESCTSAGRSDGKLWCATTANYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGAL
MAPIYTYTKHFRLSHDDIKGIQELYGASPDTDIDTGTGPTPTLGPVTPEICKQDIVFDGI
SQIRGEIFFFKDRFIWRTVTPRDKPTGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGN
EYWVYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKM
DPGFPKLIADAWNAIPDNLDAVVDLQGSGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWL
GC
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Identical sequences XP_005388374.1.28644

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