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  Home > Genomes > NCBI 2017_08 genome > XP_005406947.1.28644

Domain assignment for XP_005406947.1.28644 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  XP_005406947.1.28644
Domain Number 1 Region: 155-429
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 1.18e-86
Family Calponin-homology domain, CH-domain 0.000000903
Further Details:      
 
Domain Number 2 Region: 4464-4582
Classification Level Classification E-value
Superfamily Spectrin repeat 1.92e-28
Family Spectrin repeat 0.0011
Further Details:      
 
Domain Number 3 Region: 4639-4798
Classification Level Classification E-value
Superfamily Spectrin repeat 2.61e-28
Family Spectrin repeat 0.004
Further Details:      
 
Domain Number 4 Region: 445-561
Classification Level Classification E-value
Superfamily Spectrin repeat 9.64e-28
Family Spectrin repeat 0.0024
Further Details:      
 
Domain Number 5 Region: 4881-5015
Classification Level Classification E-value
Superfamily Spectrin repeat 8.24e-26
Family Spectrin repeat 0.0022
Further Details:      
 
Domain Number 6 Region: 4311-4470
Classification Level Classification E-value
Superfamily Spectrin repeat 2.62e-25
Family Spectrin repeat 0.0057
Further Details:      
 
Domain Number 7 Region: 3980-4139
Classification Level Classification E-value
Superfamily Spectrin repeat 1.1e-24
Family Spectrin repeat 0.0038
Further Details:      
 
Domain Number 8 Region: 3000-3155
Classification Level Classification E-value
Superfamily Spectrin repeat 9.36e-22
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 9 Region: 3438-3594
Classification Level Classification E-value
Superfamily Spectrin repeat 2.16e-21
Family Spectrin repeat 0.0035
Further Details:      
 
Domain Number 10 Region: 5011-5126
Classification Level Classification E-value
Superfamily Spectrin repeat 2.28e-21
Family Spectrin repeat 0.007
Further Details:      
 
Domain Number 11 Region: 5373-5455
Classification Level Classification E-value
Superfamily GAS2 domain-like 1.2e-20
Family GAS2 domain 0.0006
Further Details:      
 
Domain Number 12 Region: 4801-4910
Classification Level Classification E-value
Superfamily Spectrin repeat 1.96e-20
Family Spectrin repeat 0.0048
Further Details:      
 
Domain Number 13 Region: 2219-2359
Classification Level Classification E-value
Superfamily Spectrin repeat 1.03e-19
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 14 Region: 3873-4020
Classification Level Classification E-value
Superfamily Spectrin repeat 1.37e-19
Family Spectrin repeat 0.0033
Further Details:      
 
Domain Number 15 Region: 2668-2794
Classification Level Classification E-value
Superfamily Spectrin repeat 2.88e-18
Family Spectrin repeat 0.0037
Further Details:      
 
Domain Number 16 Region: 3589-3705
Classification Level Classification E-value
Superfamily Spectrin repeat 5.18e-17
Family Spectrin repeat 0.002
Further Details:      
 
Domain Number 17 Region: 1414-1542,1569-1597
Classification Level Classification E-value
Superfamily Spectrin repeat 9.6e-17
Family Spectrin repeat 0.0065
Further Details:      
 
Domain Number 18 Region: 3214-3374
Classification Level Classification E-value
Superfamily Spectrin repeat 5.55e-16
Family Spectrin repeat 0.021
Further Details:      
 
Domain Number 19 Region: 5284-5364
Classification Level Classification E-value
Superfamily EF-hand 7.47e-16
Family Polcalcin 0.044
Further Details:      
 
Domain Number 20 Region: 879-981
Classification Level Classification E-value
Superfamily Spectrin repeat 7.63e-16
Family Spectrin repeat 0.0035
Further Details:      
 
Domain Number 21 Region: 1964-2087
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000256
Family Spectrin repeat 0.0055
Further Details:      
 
Domain Number 22 Region: 4137-4250
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000131
Family Spectrin repeat 0.011
Further Details:      
 
Domain Number 23 Region: 2137-2250
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000327
Family Spectrin repeat 0.0049
Further Details:      
 
Domain Number 24 Region: 2888-3011
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000352
Family Spectrin repeat 0.0069
Further Details:      
 
Domain Number 25 Region: 3712-3815
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000798
Family Spectrin repeat 0.0058
Further Details:      
 
Domain Number 26 Region: 5137-5271
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000117
Family Spectrin repeat 0.0054
Further Details:      
 
Domain Number 27 Region: 2801-2901
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000023
Family Spectrin repeat 0.013
Further Details:      
 
Domain Number 28 Region: 2417-2537
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000381
Family Spectrin repeat 0.01
Further Details:      
 
Domain Number 29 Region: 2576-2685
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000147
Family Spectrin repeat 0.01
Further Details:      
 
Domain Number 30 Region: 786-878
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000445
Family Spectrin repeat 0.0045
Further Details:      
 
Domain Number 31 Region: 960-1061,1182-1202
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000012
Family Spectrin repeat 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_005406947.1.28644
Sequence length 5680
Comment PREDICTED: dystonin isoform X6 [Chinchilla lanigera]; AA=GCF_000276665.1; RF=representative genome; TAX=34839; STAX=34839; NAME=Chinchilla lanigera; AL=Scaffold; RT=Major
Sequence 
MIAAAFLVLLRPYSIQCALFLLLLLLGTIATIVFCCCWHRRLQKGRHPMRSVFSGRSRSR
DAVLRSHHFRSEGFRASPRHLRRRIAAAAAARLEEVKPAVEEHRQSEQEASARKRRIKKS
SRVQPEFYHSVQGASTRRPSSGNASYRCSMSSSADFSDEDDFSQKSGSASPAPGDTLPWN
LPKHERSKRKIQGGSVLDPAERAVLRIADERDKVQKKTFTKWINQHLMKVRKHVNDLYED
LRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGN
PKLTLGLIWTIILHFQISDIHVTGESEDMSAKERLLLWTQQATEGYAGVRCENFTTCWRD
GKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKS
VITYVSSLYDAFPKVPEGGEGIGANDVEVKWIEYQNMVNYLIQWIRHHVTTMSERTFPNN
PVELKALYNQYLQFKETEIPPKETEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDLEKEW
GKLIVAMLEREKALRPEVERLEMLQQIASRVQRDSVVCEDKLMLARNALQSDSKRLESGV
QFQNEAEIAGYILECENLLRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRNECSS
VYSKGRMLTAEQTKLMISGISQSLNSGFAQTYNPTLNSGLTQGLTPSLTSSSVTSGLSSG
LTSRLTPSVTPAYTPGFPSGFIPNFSPGLEPNSLQSLKLMQIRKPLLKSSLLDQNLTEEE
VNMKFVQDLLNWVDEMQVQLDHTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISE
IQMTAPLKLTYAEKLHRLESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEEEE
VAYDWSERNTHIARKKDYHAELMRELEQKEENIKSVQEIAEQLLLENHPARLTIEAYKAA
MQTQWSWVLQLCQCVEQHIKENTAYLEFFSDAKEATDYLKNLKDAIQRKYSCDRSSSIHK
LEDLVQESMEEKEELLQYKSTVASLMGRAKTIIQLKPRNPDCPLKTSVPITAICDYRQIE
ITIYKDDECVLANNSHRAKWKVISPTGNEAMVPSVCFTVPPPNKEAVDFANRIEQQYQNV
LSLWHESHINMKSVVSWHYLINEIDGVRASNVASIKTMLPGEHQQVLSNLQSRFEDFLED
SQESQIFSGSDITQLEKEVNVCKQYYQELLKSAEREEQEESVYNLYISEVRNIRLRLENC
EDRLIRQIRTPLERDDLHESVFRIAEQEKLKKELERLKDDLGSITNKCEEFFSQAAASLS
VPTLRSELSAVIQNMNQVRSMSSTYTEKLKTVNLVLKNTQAAEALVKLYETKLCEEEALT
ADKNNIENLISTLKQWRTEVDAKRQVFHALEDELQKAKAISDEMFKTYKERDLDFDWHKE
KADQLVERWQNVHVQIDNRLRDLEGIGKSLKYYRDTCHPLDDWIQQVETTQRKIQENQPE
NSKTLATQLNQQKMLVSEIEMKQNKMDECQKYAEQYSASVKDYELQTMTYRAMVDSQQKS
PVKRRRMQSSADVIIQEFMDLRTRYTALVTLMTQYIKFAGDSLKRLEEEEKSLEEEKKEH
IEKAKELQKWVSNISKTLRDGEKAGKSSFSKQKISSEELSTKKEQLSEALQNMQLFLAKH
GDKMTDEERNELEKQVKTLQEGYNLLFSECLKQLEESQTSGDINIEEKTVAERQHEYKEK
LQGICDLLTQTENRLIGHQEAFVIGDGTVELKKYKSEQEELQKDMQRSAQALAEIVKNTE
NFLKENGEKLSQDDKALIEQKLSEAKIKCEQLNLKAEQSKKELDKVVKTAIKEETEKVAA
VKQLEESKTKIEDLLDWLSDIDNDSGRAGTEHKQVIEQNGTHLDEGDGRLVIGEEDDVNG
NLQAADVDEHVGSTEGNLNQQYQKIKAQHEKIISRHQAVIVATQSAQALLEKQGHYLSPE
EKEKLQKNMKELKAQYETTLAASEKKMKLTHSLQEELEKFDADYGEFEHWLQQSEQELEN
LAAGVDDLSGLLTTLSRQKSFSEDVISHKGDLRYITISGNRVLEAAKSCSRREGSKVDKD
DVDTSATHREVQSKLDRATDRFRSLYSKCNVLGNNLKDLVDKYQHYKDASCGLLSALQSS
ETLANKHLLEPIAVDPQNLQRQLEETKALQGQISSQQVAVEKLKKTAEVLLDARGSLLPA
KDDIQKTLDDIVGRYDDLSKSVNERNEKLQITLTRSLSVQDGLDEMLGWMGGVESSLKEQ
GQVPLNSAALQDLISKNIMLEQDITGRQSSINAMNEKVKKFMETTDPSTASSLQAKMKDL
SKRFSEASQKHREKLAKMEELKTKVELFESLSGKLQTFLETKSQALTEVDVPGKDVAELS
QYMQESTSEFLEHKKDLEALHNLLTEISSHGLPGDKALVFEKTNNLSKKFKEMEDTIKEK
KEAVTSCQEQLEAFRVLVKSLKSWIKETTEQVPILQPSFGAEDLGKSLEEAKKLQEKWSL
KTPEIQKVNNSGVSLCNLISAVTTPARAVAAVKSGGVILNGEGIDTNTQDFLTNKGLTSV
QKDMTDISHGYEDLGLLLKDKIAELNTKLFKLQKAQEESSSMMQWLEKMNKTAAKWHQTP
APADSEAVKTQFEQNKSFEAELKQNVNKVQELKDKLTELLEENPDIPEAPKWKQILTEID
SKWQELNQLTVDRQQKLEESSNNLTQFQTVEAQLKQWLVEKELMVSVLGPLSIDPNMLNT
QKQQVQILLQEFDTRKPQYEQLRTAGQGILSRPGEDPSLHGVVKEQLAAVTQKWDGLTGQ
LSDRCDRIDQAIVQSTQYQSLLRSLSEKLSELERKLSSSLAASTCADAVNQQLEAAQKLK
QEIEQETPQIKAAQVLCADLSTLVKEEYLKAELTRQLDSILKSFKEIEQKAENLVQHLQS
ACASSHQFQQMSRDFQAWLDTKKEEQKKSHPVSAKLKVLESLITDQKDFSQTLAAQSNIY
EKTIAEGENLLLKTQGSEKAAVQLQLTTIKNSWDGFNKQVKEREDKLKDAFEKALKYKEH
VETLRPWIDKCQNNLEEVKFCLDPAETENSISKLKSLQKEMDQHFGMVELLNNTANSLLS
VCEVDKEVVTDENKALIQKVDSVTEQLHRKKFSLENTAQKFKEFQEVSKETNRQLQCAKE
QLDVHDSLGPQAYSNKCLTMLQAQQKALQTLKHQVDLARRLAQDLVVEASDSKGTSDVLL
QAETLAQEHSALSQQVDEKCSFLETKLQGIGHFQNTIRELFSQFAEFDDELDSMAPVGRD
VETLQMQKEAIKAFMKKLGALIASNDNANKTCKMMLATEEASPDLVGIKRDLEALSKQCN
KLLDRARTREEQVEGMHERLEEFYSKFKEFSTLLQKAEEHEESQGPVGMDIETINQQLAV
FKVFQKEEIEPLQVKQQDVNWLGQGLIQSAAKNTSTQGLEHDLEDVSARWKTLNKKVAQR
AAQMQEALLRCGRFQDALESLLSWMVDTEELVANQKPPSAEFKVVKAQMQEQKLLQRLLD
DRKSTVEVIKREGEKIAATAETADKVKILKQLSLLDSRWETLLDKVETRNRQLEGISVVA
QQFHETLEPLNEWLTTVEKRLASCDPIGTQASKLEGQIAQHKALEDDIISHSKHLHQAVS
IGQSLKVLSSREDKDMVQNKLNRSQVWYIEIQEKSLSRSELLRQALCNTKIFGEDEVELM
TWLNEMHDILSKLSVQDCSPEGLWKQQAELRVLQEDILLRKQNVDQALLNGLELLKHTTG
DEVVIIQDKLEAIKARYRDITKLSTDVATTLEQVLELSRRLHSTHQELCTWLDKVEVELL
SYETQALKGEAANQVHTRQKELKKEAKNNKALLDSLNEVSSALLELVPWRAREGLGKMVA
EDNERYRSVSDTITQKVEEMDAAILRSQQFDQAADAELSWITETEKKLMSLGDIRLEQDQ
TSAQLQVQKTFTMEILRHKDIIDELVKSGDKIMATSSEEEKQSMKNKLDKVLKNYDAICQ
INSERYLQLERAQSLINQFWETYEELWPWLTETQQIISQLPAPALEYETLRQQQEEHRQL
RELIAEHKPHIDKMNKTGPQLLELSPGEGFSIQEKYVAADTLYSQIKEDVKKRAVALDEA
MAQSTQFHDKIDQIRESLERVVERLRQPPSISAEVEKIKEQISENKNISVDMEKLQPLYE
TLKLRGEEMIARSGGTDKDISAKAVRNKLDQMVFIWENIHTLVEEREAKLLDVMELAEKF
WCDHMALVVTTKDTQDLIRDLEDPGIDPSVVKEQQEAAEAIREEIDGLQEELDMVVNLGS
ELIAACGEPDKPIVKKSIDELNSAWDSLNKAWKDRIDRLEEAMQTAVQYQDGLQAVFDWV
DIAGGKLASMSPIGTDLETVKQQIEELKQFKSEAYQQQIEMERLNHQAELLLKKVKEESD
KHTVQDPLMELKLIWDSLDERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLLSEQ
KPVGSDPKAIEVELAKHHVLQNDVLAHQSTVEAVNKAGSDLIESSAGEEASNLQHKLEVL
NQRWQNVLEKTEQRKQQLDGALRQAKGFRGEIEDLQQWLTDTERHLLASKPLGGLPETAK
EQLNAHMEVCAAFDVKEETYRSLMQKGQQMLASCPKSAETNVDQDINNLKEKWESVETKL
NERKIKLEEALSLAVQFHDSLQDFISWLTQAEQTLNVASRPSLILDTVLFQIDEHRVFAN
EVNSHREQIVELDKTGTHLKYFSQKQDVVLIKNLLISVQSRWEKVVQRLIERGRSLDDAR
KRAKQFHEAWSKLMEWLEESENTLDSDLEIANDPDKIKAQLAQHKEFQKSLGAKHSVYDT
TNRTGRSLKEKTCLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDAL
QALIDWLYRVEPQLAEDQPVHGDIDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIE
GSRDDSSWVKVQMQELSTRWETVCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQ
TLRFHGVLPDDEDALRTLIDQHKEFMKKLEEKRAELNKATSMGDAVLAICHPDSITTIKH
WITIIRARFEEVLAWAKQHQQRLASALAGLIAKKELLEALLSWLQWAETTLSEKDKEDIP
SEIEEVKALIAEHQSFMEEMTRKQPDVDKVTKTYKRRGADPPTLQSHIPVLDKGRAGRKR
FPASSLYPSGSHTQIETKNPRVNLLVSKWQQVWLLALERRRKLNDALDRLEELREFANFD
FDIWRKKYMRWMNHKKSRVMDFFRRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVAD
IFDRDGDGYIDYYEFVAALHPNKDAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDN
KYRFFLGNQFGDSQQLRLVRILRSTVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREK
FILADGASQGMAPFRPRGRRSRPSSRGASPNRSTSVSSQAGQGASPQVPATTTPKILHPL
TRNYGKPWLTNSKMSTPCKPAECPDFAVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSGL
ITTAAARVRTQFADPKRTPSRPGSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVEPA
PQTHRPAPRAGSRPSTGKPSKIPTPQRRSPASRLDKSSKR
Download sequence
Identical sequences XP_005406947.1.28644

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.