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Domain assignment for XP_005953143.2.24487 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_005953143.2.24487
Domain Number 1 Region: 417-566
Classification Level Classification E-value
Superfamily TRAF domain-like 3.6e-51
Family MATH domain 0.000000123
Further Details:      
 
Domain Number 2 Region: 378-416
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.000000000000194
Family Trimerization domain of TRAF 0.0012
Further Details:      
 
Domain Number 3 Region: 27-74
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000252
Family RING finger domain, C3HC4 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_005953143.2.24487
Sequence length 568
Comment PREDICTED: TNF receptor-associated factor 2-like [Haplochromis burtoni]; AA=GCF_000239415.1; RF=representative genome; TAX=8153; STAX=8153; NAME=Haplochromis burtoni; AL=Scaffold; RT=Major
Sequence
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSNGPQKCNACIKEDIFEDPTSILKQGCAFPDNAVRREVENLPAVCINESCTWKGSIKE
YEMNHEGKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFKAPCRFHVVGCDTSVEKEKIHDHERQCS
YEHLNLLLHFIMGIKVSLESLQPQSLEVASQKLQELHQSLRDLELKMSQLGGCVAAPVQG
ACAPTLTTSFTPLPSAMGAALELQLQSEKTKVAELSRRCQELELKVSTFENIVCVLNREM
ERSCTTMEAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMEGKMREMSAATYDGI
FVWKISDFTRKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVV
MRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFC
PLSKLDSKNSYIRDDTIFIKAIVDLTGL
Download sequence
Identical sequences XP_005953143.2.24487

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