SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_006217608.1.17985 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_006217608.1.17985
Domain Number 1 Region: 2039-2207
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 1.49e-16
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.0082
Further Details:      
 
Domain Number 2 Region: 2678-2729
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000129
Family TSP-1 type 1 repeat 0.00075
Further Details:      
 
Domain Number 3 Region: 2944-3002
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000366
Family TSP-1 type 1 repeat 0.00054
Further Details:      
 
Domain Number 4 Region: 3974-4031
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000000824
Family TSP-1 type 1 repeat 0.00029
Further Details:      
 
Domain Number 5 Region: 4227-4274
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000157
Family TSP-1 type 1 repeat 0.00073
Further Details:      
 
Domain Number 6 Region: 3217-3265
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000000275
Family TSP-1 type 1 repeat 0.0005
Further Details:      
 
Domain Number 7 Region: 2790-2846
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000275
Family TSP-1 type 1 repeat 0.00059
Further Details:      
 
Domain Number 8 Region: 3787-3840
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000288
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Domain Number 9 Region: 1668-1717
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000327
Family TSP-1 type 1 repeat 0.00076
Further Details:      
 
Domain Number 10 Region: 3915-3974
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000366
Family TSP-1 type 1 repeat 0.00095
Further Details:      
 
Domain Number 11 Region: 3368-3427
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000000929
Family TSP-1 type 1 repeat 0.00058
Further Details:      
 
Domain Number 12 Region: 1266-1329
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000000012
Family ATI-like 0.039
Further Details:      
 
Domain Number 13 Region: 1412-1449
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 14 Region: 3051-3108
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.00000000706
Family BSTI 0.042
Further Details:      
 
Domain Number 15 Region: 459-521
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.00000000801
Family BSTI 0.05
Further Details:      
 
Domain Number 16 Region: 2427-2463
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000877
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 17 Region: 3435-3483
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000981
Family TSP-1 type 1 repeat 0.00086
Further Details:      
 
Domain Number 18 Region: 2464-2517
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000144
Family TSP-1 type 1 repeat 0.003
Further Details:      
 
Domain Number 19 Region: 3147-3213
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000157
Family TSP-1 type 1 repeat 0.002
Further Details:      
 
Domain Number 20 Region: 4739-4788
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000327
Family TSP-1 type 1 repeat 0.0014
Further Details:      
 
Domain Number 21 Region: 2211-2248
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000353
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 22 Region: 4793-4850
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000000379
Family BSTI 0.048
Further Details:      
 
Domain Number 23 Region: 1784-1843
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000000484
Family ATI-like 0.083
Further Details:      
 
Domain Number 24 Region: 1723-1776
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000068
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Domain Number 25 Region: 4954-5021
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000691
Family VWC domain 0.077
Further Details:      
 
Domain Number 26 Region: 1371-1407
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000825
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 27 Region: 1448-1483
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000106
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 28 Region: 1487-1524
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000118
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 29 Region: 817-877
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.000000183
Family ATI-like 0.051
Further Details:      
 
Domain Number 30 Region: 2364-2403
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000223
Family LDL receptor-like module 0.0018
Further Details:      
 
Domain Number 31 Region: 3007-3046
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000589
Family TSP-1 type 1 repeat 0.0031
Further Details:      
 
Domain Number 32 Region: 2596-2641
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.000000785
Family ATI-like 0.028
Further Details:      
 
Domain Number 33 Region: 2738-2787
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000876
Family TSP-1 type 1 repeat 0.00093
Further Details:      
 
Domain Number 34 Region: 4585-4638
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000101
Family TSP-1 type 1 repeat 0.0017
Further Details:      
 
Domain Number 35 Region: 4031-4090
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.00000196
Family ATI-like 0.046
Further Details:      
 
Domain Number 36 Region: 4129-4184
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000209
Family TSP-1 type 1 repeat 0.0022
Further Details:      
 
Domain Number 37 Region: 4898-4962
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.00000314
Family ATI-like 0.018
Further Details:      
 
Domain Number 38 Region: 4395-4453
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.00000353
Family ATI-like 0.019
Further Details:      
 
Domain Number 39 Region: 3280-3329
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.00000425
Family BSTI 0.034
Further Details:      
 
Domain Number 40 Region: 964-1011
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000628
Family VWC domain 0.083
Further Details:      
 
Domain Number 41 Region: 3854-3906
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000068
Family TSP-1 type 1 repeat 0.0016
Further Details:      
 
Domain Number 42 Region: 884-914
Classification Level Classification E-value
Superfamily PMP inhibitors 0.00000968
Family PMP inhibitors 0.0018
Further Details:      
 
Domain Number 43 Region: 4652-4701
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000157
Family ATI-like 0.061
Further Details:      
 
Domain Number 44 Region: 4287-4335
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000196
Family TSP-1 type 1 repeat 0.0032
Further Details:      
 
Domain Number 45 Region: 918-972
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000222
Family ATI-like 0.064
Further Details:      
 
Domain Number 46 Region: 1880-1938
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000235
Family TSP-1 type 1 repeat 0.0014
Further Details:      
 
Domain Number 47 Region: 2846-2911
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000589
Family ATI-like 0.073
Further Details:      
 
Domain Number 48 Region: 3654-3711
Classification Level Classification E-value
Superfamily Serine protease inhibitors 0.0000719
Family BSTI 0.058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_006217608.1.17985
Sequence length 5125
Comment PREDICTED: LOW QUALITY PROTEIN: SCO-spondin [Vicugna pacos]; AA=GCF_000164845.2; RF=representative genome; TAX=30538; STAX=30538; NAME=Vicugna pacos; AL=Scaffold; RT=Minor
Sequence
MLLPVLLFRMAWALTNGRWCERTETILGEEEVSPRQEDLVPCTNLYHYQRRGWQLDLTWS
GRAGLCPIYKPPETRPAAWNRTVRACCPGWGGPHCTLALAEASPEGHCFATWLCQPRAGS
ANASAASLKECCAQPWGHSWRDGHSQACHSCSSHQLPGNTPSPALLQPLAGAVAQLLSQR
QRLSATCSTWSGFHYRTFDGRHYHFLGRCTYLLAGAADSTWAVYLEPRGHCPPDGHCQLA
RVVMGPEEVLIQGGNVSVNGQLVPEGESWLLPGLSLQWQGDWLVLSGGLGVVVRLDRSSS
VSISVDHELQGQTQGLCGVYNDQPEDDFLEPGRGLAGLAATFGNSWRLPDSEPGCPDAVE
AAQGCEDPLRSPEAGMEAGQLRAEAQDVCHQLLDGPFRECHAQIPPAEYHEACLFAYCAG
APAGSGREERLEAVCATVASYAQDCAARRVRVRWRKPGFCERLCPGGQLYSDCASACPPS
CSAVGEGGEVYCGEQCVSGCECPPGLFWDGALCVPAARCPCYHRRRRYDPGDTVHQLCNP
CVCQNGRWLCAQAPCPAECAVGGDGHYLTFDGRSFSFRGSPGCRSSLVQDFAKKQLLIIL
EHGDCESGSCLHAISVSLGDTRIQLRDSGAVLVDGQDVVLPWSGAQGLSISRASSTFLLL
RWPGARVLWGVFDPAAYITLDPPYAHQVQGLCGTFTWNQQDDFLTPAGDVETSIAAFASK
FQVAGKGRCLLEDSTPLSPCSTHSQRHIFAEATCAILHGPDFQECHGLVEREPFHLRCLA
AVCGCAPGRDCLCPVLAAYARHCAQEGALLSWRNQTLCPVLCPGGQEYQECAPACGQNCG
EPEHCAELGGCVAGCNCPLGLLWDPEGQCVPPSLCSCQLGAQRYAPGSAILKDCNRCVCQ
ERGLWNCTAHGCAPPRAFCPGELVYAPGACLLTCDRPGANHSCPPGSVGECVCPPGTVLL
DKRCVPPELCPCRHSGQWYPPNATIQEDCNTCVCQGQQWHCTGQRCDGRCQASGAPHYVT
FDGLALTFPGACEYLLVQEASGRFTVSAQNLPCGASGLTCTKALTVRLQGTVVHMLRGRA
VTVNGVSVTPPRVYTGPGLSLRRAGLFLLLTTRLGLTLLWDGGTRVLVQLSPQFRGQVAG
LCGDFDGDASNDLRSRQGVLEPTAELAAHSWRLNPLCPEPGDLLHPCTVNAHRAGWARAR
CGVMLQPLFARCHAEVPPQRHYEWCVYDTCGCDSGGDCECLCSAIATYADECARHGVHVR
WRSQELCPLQCEGGQVYEACGPTCPPSCHDHGSEPGWHCQAIACVEGCFCPEGTLLHGGV
CLEPASCPCELGDSFFPPGTVLQKDCGNCTCQDSQWLCGDDGTHCEELVPGCAEGEAPCQ
ESGHCVPSGWLCDNQDDCGNGSDEEGCATPGCTEGQMSCGSGHCLPLALRCDGQDDCEDG
TDEQGCPCPQGSLACANGHCLTPALLCDGHPDCPDAADEESCLGQVNCTPLEVSCVDGTC
VGAIQLCDGVWDCPDGADEGPGHCSLPSLPTPPAGTLPALSVSQETVPTSLASATPASPH
QTGGFPGGKSALRVLAKRGRSPFPCGLAPQLYLNPERLCNGIPDCPQGEDELGCEGLSAS
GGPNETGAPCPEYTCPDGLCIDFQLVCDGQRHCELAGEAGPSPEEQGCGTWGPWSPWEPC
SQTCGPGVQGRSRHCSPPSLPVLQHCPGPEHQTQACFTAACPVDGEWTSWSPWSPCSEPC
RGTTTRQRQCHPPQNGGRACAMLPRDPHGTHQTRPCSQDGCPNVTCSGELVFHPCAPCPL
TCDDISGQAVCPRDPPCSSPGCWCPTGQVLNHEGQCVWPRQCPCLVDGTRYRPGQRIKAD
CQLCICQDGQPRRCRPHPDCAVNCGWSSWSPWAECLGPCGSQSIQWSFRSPNNPRLSGRG
RQCRGIHRKARRCQTAPCEGCEQHGQVHSAGERWRGGPCRVCQCLHNGTARCSPYCPLGS
CPQDWVLVEGTGEPCCGCVLPGENKTVHPMATPAPAPAPSPQIGLPLITYVPPPPGDPCY
SPLDLTRLPEGSLHASPPQPEHPAWAAQPRPPSGGPGQWIQGSVDDAYTQQHAGPPTLRD
AYVTLDLLQPRNLTGIVVQGPGSSDLLQFSSDGLHWHNYRDLLPGTQPPPKLFPGNWDEM
APTVWTFGQMVQAQHIRVWPPEVHRGAAPLRDTNHSIPLRVVLLGCESALPCPGVGHRCA
SGECTPKGAPCDGVEDCEDGSDEEGCVPQPGTGRVQSTARTLVPSSTQPGQLPPVPREGL
AEPEAERWRQGLGSPTPSTGKGPLSPVSTPHPSPGESVQTMITTPTSQPEAKALRPEMAA
VTVLPQHPTTPGAPAGQNITPGPFPPVRCSPGQVPCEVLGCVGQEQLCDGKEDCLDGSDE
RLCAWAASTAPFAVPTTALPGLPASRALCSPSQLSCGSGECLPAERRCDLQHDCQDGSDE
DGCVDCGLAPWSGWSGCSHSCGLGLAFQRRELLWPPLPGGSCPPDRLRSQPCFVQACPVA
GAWAVWVPWGPVAPLGGXXXXXXXXXXXXXXKKGGAPCPGASQERAPCGLQPCAGGTDCG
LGRLHVSAELCQKGLVPPCPPSCLDPEANRSCSGHCLEGCRCPPGLLLQDARCLPLSECP
CLVGEELQQPGVPFTLDNCSRCVCEKGALLCEPGGCPVPCGWSAWSSWGPCDRSCGSGMR
TRFRSPSNPPAAFGGAPCEGERQELQTCHSECGAEALGWTPWAPWSACSQSCLVPGGGPG
WRSRSRLCPSPRDTSCPGESTQEEPCSLPVCPGMGLWAPWAAWSSCSAPCDGGIQTRGRS
CSASAPGDPGCQGPHSQTRDCNTQPCTGQCPGDMVFRSAEQCHQEGGPCPQLCLAQGPGV
ECTGFCTPGCSCPPGLFLHNTSCLPLSQCPCQLHGQLYAPGAVTQLDCNNCTCTSGEMVC
TSEPCPVACGWSPWTPWSLCSRSCNVGIRRRFRAGTAPPAAFGGAACQGPSMEAEFCSLR
PCRGPGEEWGPWSPCSVPCGGGYRNRTRGSGRNSPVDFSTCGLQPCVGPVPGVCPLGKQW
LDCAQGPASCAELSTPRETDHPCHPGCYCPSGTLLLNNVCVPTQDCPCAHGGRLHPPGSA
VLRSCENCSCVSGLITNCTSWPCDEGQPTWSPWTPWSECSASCGPARRHRHRFCTRPPSV
APSSVALLPPPASARPLCPGPEAEEEPCLLPGCDRAGGWGPWGPWSSCSRSCGGGLRSRT
RACDQPPPQGLGDYCEGPQAQGAACQALPCPVTNCTAIQGAEYSTCGPPCPRSCDDLVHC
VWHCQPGCYCPPGQVLSADGAVCVQPSHCSCLDLLTGERHRPGAQLARPDGCNYCTCSEG
RLTCTELPCPVPGGWCPWSEWTACSLPCRGQTRTRARACTCPAPQHGGAPCPGEAGEVGA
QHQRETCASPPECPVDGAWSPWGPWSPCDVCLGQSHRSRECSWPPTPEGGRPCPGGHRQT
RPCQGNSSRCTDCVGGQGLLPCGWPCPRSCQDLSLGVVCQPSSTGCQPSCGCPPSQLSQD
GLCVSPAQCRCQFQPRAMGIPENQSRSAGSRLSSWESLEPGEVVTGPCDNCTCVAGILQC
QGVPDCIGRATWGTWGDGHWGEERRVVGRAQKXAARAAWAGAGPSDVTVASEAGCPAGRL
YRECQPGEGCPFSCAHVTRQVGCFSQGCEEGCHCPEGTFQHRSACVQECPCVLTAALLQE
LGDASADPGAHPPILGEGGQPLGPGDELGSGQSLHAGCSNCSCVHGKLSCFVGNCSQADG
GFGPWGSLGPWGPWGPCSRSCGGLGTRTRHRQCVRPTLTPSGQGCHGPHQDLEYCPSPDC
PGAAGSTVEPVTGLPGGWGLWSPWSPCSGSCTDPAHPAWRSRTRLCLANCTGGLTSQERP
CNLPSCTELPLCPGCVAGNCSWTPWAPWEPCSRSCGVGQQRRLRAYHPPGPGGHWCPDIL
TAYQEHRFCNLRACPVPGGWSRWSPWSWCDRSCGGGRSLRSRSCSSPPPKNGGAPCVGER
HHARLCNPMPCEEGCPAGMEVVSCANRCPRRCSDLQEGIVCQDGQACQLGCRCSEGFLEQ
DGGCVRMGHCECTDAQGRTWAPGSQHQEACNNCTCRAGRLSCTAQPCPPPAHCAWSRWSA
WSRCSHSCGPVGQQSRFRSSTSGSWAPECREEQSQSQPCPQPPCPPLCLHGSRSRLLGDS
WRQGECQQCSCTPEGVTCEDTECAGLAWTPWSPWSDCPVSCGGGNQVRTRVCVASVPRPE
GPSCLGPDTQTQPCGQQPCLRLLDACSWGSWGPCSRSCGPGLASRSGSCPCPLADPTCNG
TFLHLDTEACYPGACLEECVWSSWSSWTRCSCQVPVQQRYRHQGPVPGGARESAPCTRLD
GHFRPCLTSNCSEDSCTPPFEFQACGSPCTGLCATHLSHQLCQDLPPCQPGCYCPKGLLE
QAGSCVPPEQCNCQHISGEEAGVTLAPGDHLQLGCKECECQRGELQCTSQGCRGLLPLSD
WSEWSPCGPCLPPGILAPASRAALEERWPQDPAGLLPTSAPTLASEQHRHRLCLDPETGR
PWAGDPDLCTVPLSQQRLCPDPGACRDLCQWSSWGPWSRCQMPCSGGFRLRWREAGGPPG
GGCQGPWAQTESCNMWPCPGESCEAQNTVPTPDCANQCPRSCVDLWDHVQCLQGPCRPGC
RCPPGQLIQDGHCVPMSSCRCGLPGPNASWVLAPAEVVQLDCRNCTCVNGSLVCPSHECP
ALGPWSAWSNCSAPCGGGTTQRHRSCKEGPGSAPCQAQETEQQQECNLRPCPECPPGQVL
STCATSCPRLCSHLQPGTLCVQEPCQLGCDCPGGQLLHNGTCVPPAACPCTQLSLPWGLT
LTLEEQARELPPGTVLTQNCSRCVCQDGAFSCSLADCQECPSGEMWQQQLAPGELGLCEQ
TCREPDATETQGNCSVGQVPGCVCQRGHFRSQAGPCVPWDRCECWHHGHAHPPGSEWQEA
CESCRCISGRSVCTQHCPLLTCAQGEVAVQEPGSCCPTCRQETLEEQPAFCRHLTELRNL
TKGPCYLDQVEVTYCSGHCPSSTNVLLEEPYLQSQCDCCSYRLDPENPVRILNLHCPGGR
TELVVLPVIHSCQCSECQGGDFSKR
Download sequence
Identical sequences XP_006217608.1.17985

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]