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Domain assignment for XP_008428135.1.1237 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008428135.1.1237
Domain Number 1 Region: 373-549,582-685
Classification Level Classification E-value
Superfamily Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 2.09e-55
Family Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor 0.00044
Further Details:      
 
Domain Number 2 Region: 1047-1103
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), beta-barrel domain 1.7e-20
Family Transcription factor IIA (TFIIA), beta-barrel domain 0.0001
Further Details:      
 
Domain Number 3 Region: 678-721
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 0.000000000112
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_008428135.1.1237
Sequence length 1103
Comment PREDICTED: stonin-1 [Poecilia reticulata]; AA=GCF_000633615.1; RF=representative genome; TAX=8081; STAX=8081; NAME=Poecilia reticulata; strain=Guanapo; AL=Chromosome; RT=Major
Sequence
MCSTNHSNWVTFDDEVTPVSSPQKPLQSPSLIKASVPRPNGLKLVLPPIKDTSWSFSGSL
ESPQSQSGSSGKSFRPCSSALSTPVTRVSTSTSPFHFPSCEKNAFIRSFSSPSGVSVPSP
APETSSQPADGPNPFPAFRGNSGHFNPFWDDSRRSVDVSSSSSDSDTDNSLPRFFIRTKD
GSTPPPRDQPQNPFSFVCNKLEDLQVGNEGHTDISEGRNEVIGDGSVQFVPRGLFRSQKR
DGWPIMLRIPEKKNRMSSRQWGPIYLRLLPGGVLQMFYEKGLEKPYKEFQLLPQCRPSEL
KVENYSEPRKVLTVKVELFSYTEKKRFHPKLEVSHEAEVEQLLKFGSTAHEDMEDLVVSM
EEEIFKLSVPHQQRRQYEEQELSLQVTDHIWIHLDKLGTVMERAAFTQIHCLAFLNGQGD
CFLALNDLGLLHSNSSYGYEEDSDLWMEITDQHFHQCVNETEFQMSRLIKFSPPDACRVE
LMRYKTAVLGCTEIPFSIKAVVTVQGAYVELQAFLNMSATFLSSLRTSDTSQPLCENVVI
RIPVPGDWVKVTQTVALLRQRSLKARMNRNACLGSVRAADSQPVMQVSIGSVKYENVYSA
IVWRIDRLPAKNTAMDHPHSFSCKLELGSDQEIPCDWYPFVSMECEISGAVVSLTRVKSL
GTVNDIQPQKHVTSWTRYHCQAKLYLSIMDDVIDGMKELFLDEGLEDRVLDDLRHLWESK
VLQSRAMEDFRKNINSSNFVLQLPASYSQADQNQELPAPGLTQTGQNIHSLPVQNKTKTL
ATFSLPAALPYPIKIPAGVTLQTASGQLYKVNVPVVVTHAPAGQRAASRLSQTVPEQSEA
AAPPNPIPLHEPESCSAPDSFVTQSRTGLTPSQESGLPREPPGREVTLGGSDSSAQPEPG
SPCSQLLDIQISAEEAALAQRTQSRDIDEILKEVIEEEREKASRVWKLAAGNQSGADLGL
DLDYTYRELSDIVQLDGPADGSDPEEEGEAPMEESDFLGLINAEAIRALQEENCSDGDSI
SSSSDEGVAHELANVEDEDPLNSGDDVVEQDIPDLFDTDNVIVCQYDKIHRSKNRWKFHL
KDGVMSYGGRDYVFSKAVGEAEW
Download sequence
Identical sequences XP_008428135.1.1237

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