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Domain assignment for XP_009375942.1.93535 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009375942.1.93535
Domain Number 1 Region: 331-387
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), beta-barrel domain 3.4e-21
Family Transcription factor IIA (TFIIA), beta-barrel domain 0.00082
Further Details:      
 
Domain Number 2 Region: 4-45
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 0.0000000000112
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.0018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_009375942.1.93535
Sequence length 387
Comment PREDICTED: transcription initiation factor IIA large subunit [Pyrus x bretschneideri]; AA=GCF_000315295.1; RF=representative genome; TAX=225117; STAX=225117; NAME=Pyrus x bretschneideri; cultivar=Dangshansuli; AL=Scaffold; RT=Major
Sequence
MAASTSSVYVNVIEDVINKVREEFMNNGPGEDVLKELQGTWEAKTMQAGVVNNPIERSAA
KGTPGSGVTPVHDLNVPYEGTEEYETPTAEILFPPTPLQTPIPATPIQTPLPGTGDNLYN
IPTGGSDYSANESGSSNGGVNAETKGGRPSPYMQPPSTWMNHRPPLDVNIAYVEGRDEVD
RGASHQPPTQDFLQMNSGKRKREDFPAQYQAGGFIPQQDGAGDAAPEKFEIEVSGGSTSI
ASRAWSEMLTRVRSSTPKIPQLDGPIPDPYDELSTPNIYNYQGTFNEDYNVASTPAPHDI
PVSTPAPVVQNDVGDDDDDEPPLNENDDDELDDVDQGDELNTAHLVLAQFDKVTRTKSKW
KCTLKDGIMHINNKDVLFNKANGEFDF
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Identical sequences XP_009375942.1.93535

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