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Domain assignment for XP_012679965.1.3086 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012679965.1.3086
Domain Number 1 Region: 46-196
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 2.36e-31
Family Calponin-homology domain, CH-domain 0.0023
Further Details:      
 
Domain Number 2 Region: 225-296
Classification Level Classification E-value
Superfamily GAS2 domain-like 1.57e-24
Family GAS2 domain 0.000064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012679965.1.3086
Sequence length 673
Comment PREDICTED: GAS2-like protein 3 [Clupea harengus]; AA=GCF_000966335.1; RF=representative genome; TAX=7950; STAX=7950; NAME=Clupea harengus; AL=Scaffold; RT=Major
Sequence
MAVQAGLQSWFERFDSPIQAPRSPLAARHGPGLADVFQYDQWLAVRHEATLVPMQEDLAI
WITSMLGEEVRAEHFMEELGNGVKLCRLIEVLQTQVSQSCPSDKWQHFSMKKVPFKRVAS
PGSFFARDNTANFLSWCRQIGVDETFMFESEGLVLHKNPRQVCLCLLQIGRIVSKYGVEP
PVLVKLEKEIELEETLLMGVEPAPAVKTFTVCCQHGSLYQGDHDMSDDPPCNCAQKVSIE
YLSEGRYRLGDKILFIRMLHGKHVMVRVGGGWDTLKGFLLKNDPGRVLQFTTLEQKILAY
QKGPAGPALTSQKVQPPMMDPLAAVTLSDASSTSTSSSSSSSSSSSASSSCSSPTATSKA
PLPGHCIPRSYAASPASTPTLQRKAPVPKKVLQVTPSLPKRSPYSPALVHKKAAPPQPPL
SAPPLSNGAGKQKVPTSSKLKLRQTPDGSPLLPRSPVCAEPNCKHPKSAPVTRRAVMLNP
KLGVTQKDGKPPVAPLRSRLARRRGSSPVSRLRVDNRARRPLSPRPLSPRSNTSRPASPA
SCNSLDSKSSSPSPLSRAQTPTSRTRIPTARASPLTKAKEPASKSPASSRPGTPVLAAAR
PAPSRQVPAASPRLPVKKQPLTNHSAQKPEAPQITVTKPSLKTPPVSQKATQRTKLVKKV
EPYFEMNRKQQKC
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Identical sequences XP_012679965.1.3086

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