SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_012872295.1.60039 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012872295.1.60039
Domain Number 1 Region: 568-792
Classification Level Classification E-value
Superfamily Plakin repeat 3.66e-51
Family Plakin repeat 0.00017
Further Details:      
 
Domain Number 2 Region: 796-974
Classification Level Classification E-value
Superfamily Plakin repeat 2.88e-46
Family Plakin repeat 0.00034
Further Details:      
 
Domain Number 3 Region: 1423-1614
Classification Level Classification E-value
Superfamily Plakin repeat 2.27e-41
Family Plakin repeat 0.00018
Further Details:      
 
Domain Number 4 Region: 5302-5459
Classification Level Classification E-value
Superfamily Spectrin repeat 2.04e-30
Family Spectrin repeat 0.0017
Further Details:      
 
Domain Number 5 Region: 4312-4471
Classification Level Classification E-value
Superfamily Spectrin repeat 2.74e-28
Family Spectrin repeat 0.0041
Further Details:      
 
Domain Number 6 Region: 5758-5897
Classification Level Classification E-value
Superfamily Spectrin repeat 3.14e-26
Family Spectrin repeat 0.0023
Further Details:      
 
Domain Number 7 Region: 4423-4575
Classification Level Classification E-value
Superfamily Spectrin repeat 6.67e-25
Family Spectrin repeat 0.003
Further Details:      
 
Domain Number 8 Region: 5891-6008
Classification Level Classification E-value
Superfamily Spectrin repeat 1.23e-22
Family Spectrin repeat 0.0069
Further Details:      
 
Domain Number 9 Region: 1714-1817
Classification Level Classification E-value
Superfamily Plakin repeat 1.31e-22
Family Plakin repeat 0.0011
Further Details:      
 
Domain Number 10 Region: 3877-4034
Classification Level Classification E-value
Superfamily Spectrin repeat 1.88e-22
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 11 Region: 5541-5679
Classification Level Classification E-value
Superfamily Spectrin repeat 6.15e-22
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 12 Region: 5682-5791
Classification Level Classification E-value
Superfamily Spectrin repeat 3.4e-21
Family Spectrin repeat 0.0037
Further Details:      
 
Domain Number 13 Region: 4859-5016
Classification Level Classification E-value
Superfamily Spectrin repeat 3.64e-21
Family Spectrin repeat 0.0024
Further Details:      
 
Domain Number 14 Region: 6251-6333
Classification Level Classification E-value
Superfamily GAS2 domain-like 7.32e-21
Family GAS2 domain 0.00056
Further Details:      
 
Domain Number 15 Region: 5201-5338
Classification Level Classification E-value
Superfamily Spectrin repeat 1.17e-20
Family Spectrin repeat 0.0068
Further Details:      
 
Domain Number 16 Region: 5957-6084,6111-6142
Classification Level Classification E-value
Superfamily Spectrin repeat 1.69e-20
Family Spectrin repeat 0.0067
Further Details:      
 
Domain Number 17 Region: 5092-5241
Classification Level Classification E-value
Superfamily Spectrin repeat 2.49e-20
Family Spectrin repeat 0.0032
Further Details:      
 
Domain Number 18 Region: 4547-4676
Classification Level Classification E-value
Superfamily Spectrin repeat 3.8e-16
Family Spectrin repeat 0.0049
Further Details:      
 
Domain Number 19 Region: 4641-4763
Classification Level Classification E-value
Superfamily Spectrin repeat 3.93e-16
Family Spectrin repeat 0.01
Further Details:      
 
Domain Number 20 Region: 3544-3669
Classification Level Classification E-value
Superfamily Spectrin repeat 8.04e-16
Family Spectrin repeat 0.0031
Further Details:      
 
Domain Number 21 Region: 6162-6242
Classification Level Classification E-value
Superfamily EF-hand 0.00000000000000104
Family Polcalcin 0.057
Further Details:      
 
Domain Number 22 Region: 5424-5531
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000183
Family Spectrin repeat 0.0077
Further Details:      
 
Domain Number 23 Region: 4091-4251
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000229
Family Spectrin repeat 0.013
Further Details:      
 
Domain Number 24 Region: 2987-3097
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000301
Family Spectrin repeat 0.0052
Further Details:      
 
Domain Number 25 Region: 3768-3888
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000468
Family Spectrin repeat 0.0045
Further Details:      
 
Domain Number 26 Region: 284-410,437-463
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000504
Family Spectrin repeat 0.012
Further Details:      
 
Domain Number 27 Region: 2857-2977
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000000288
Family Spectrin repeat 0.003
Further Details:      
 
Domain Number 28 Region: 1605-1709
Classification Level Classification E-value
Superfamily Plakin repeat 0.00000000000034
Family Plakin repeat 0.007
Further Details:      
 
Domain Number 29 Region: 3452-3557
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000222
Family Spectrin repeat 0.0074
Further Details:      
 
Domain Number 30 Region: 3314-3417
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000017
Family Spectrin repeat 0.0096
Further Details:      
 
Domain Number 31 Region: 5021-5127
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000993
Family Spectrin repeat 0.0047
Further Details:      
 
Domain Number 32 Region: 3674-3796
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000082
Family Spectrin repeat 0.015
Further Details:      
 
Domain Number 33 Region: 3102-3232
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000264
Family Spectrin repeat 0.0097
Further Details:      
 
Domain Number 34 Region: 2596-2747
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000288
Family Spectrin repeat 0.0061
Further Details:      
 
Domain Number 35 Region: 3191-3311
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000114
Family Spectrin repeat 0.0092
Further Details:      
 
Domain Number 36 Region: 1345-1420
Classification Level Classification E-value
Superfamily Plakin repeat 0.0000000262
Family Plakin repeat 0.0016
Further Details:      
 
Domain Number 37 Region: 2468-2621
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000411
Family Spectrin repeat 0.0082
Further Details:      
 
Domain Number 38 Region: 481-597
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000331
Family Spectrin repeat 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012872295.1.60039
Sequence length 6562
Comment PREDICTED: microtubule-actin cross-linking factor 1 isoform X2 [Dipodomys ordii]; AA=GCF_000151885.1; RF=representative genome; TAX=10020; STAX=10020; NAME=Dipodomys ordii; AL=Scaffold; RT=Major
Sequence
MALWHQLHVNTKSLISWNYLRKDLDLVQTWNLEKLRSSASGECHQVMKNLQTHYEDFLQD
SRDSALFSVADRLRLEEEVEACKAHFQHLMKSMENEDKEETVAKIYISELKNIRLRLEDC
EQRLVKRIQSPASSKMDKDARQDIALKISEQEHTQEDLQQLKSELDAVSMKCNSFLHQSP
SGSSIPTLRSELNLLVEKMDHVYGLSTVYLNKLKTIDIIVRSIQDAELLVKGYEIKLSQE
EAVPADLSALESHRSTLQHWLSDVKEKNSVFSVLDGEITKAKAVAEQMTYLTPERNLDLE
RCQEKGAQLQDRWHRVIAQLETRQSELENIQEVLGDYRACHGTLIKWIEETTAQQEMMKP
GQAEDSRVLSEQLSQQTDLFAEIERNQTKLDQCQKFSQQYSTIVKDYELQLMTYRAFVES
QQKSPSKRRRMLSSSDAITQEFMDLRTRYTALVTLTTQHVKYISDALRRLEEEEKVVEEE
KQEHVEKVKELLGWVSTLARNTQGKIASFHPKESTDIEKAILEQQVLAEELTTKKEQVSE
AIKTSQIFLAKHGHKLSEKEKEQISEQLNALNKAYHDLCDGSANQLQQLQSQLAQQTEQK
GFRAVAGVIDLGTVEMFPIFRAMQKGLIDQDTGLMLLESQVIMSGLIAPETSEELSLEEG
LARNLINPPMYQRLWELQDTLSLVSRLTANKGPLSVVEAIEKRIISERFGLKVLEVHLAT
GGFKVFPNENCINLEEAFHQGLISAGLHSALESHLRSSRNLIDPNTAEKIGLLDLMQRCI
VHQESGLKLLPVKQLAGGMVSLKSDQKVNIFRAVQEGLIDRQVTIRLLEAQLFAGGIVDP
RTGHRLTVEEAVRHNLIDQDMACAILIRQLQTGGIIDTVTGRRITIDEAVSNDLVTAKIA
LVILESLWSFMGFLWPESGEILAITDALEQGIVSTELACKILSNREHIEALFLPETTEIC
SWKKAIETSILDKDLANSLKLICIPDVMPHMQLVDFSERKTSGTTSGTAALLCNKGQTEG
ISNHGDKLLFQLMTHSYINVHNGQRVLLLDQELMEILTSRDEYQASPSEVLEIGHYRLDN
PKKFQESASENITETFNDKLTVRFQFFSQNKEYTHQEDCAEAKGKKTVIGIKYSSLENPE
KDLSIGEQKVVTGNVDSLKVINKVNSELQRQLLNTKNEDQTETSTRENASRELLVIPPKE
TEGRPLVVDKDVFSVETTKGKWQAPRKTSFTSQKEQAKSHKTEYIPSETKRPLIKSQRKK
SQVQAEKSGLKLGFKSESDVNIHSLDKEKVLSEMLLAKDGCKQSQEGQRVADGDMVIIQK
TDTEDHDIETSFSCNHPELLKEAPLNVLSAQLLDGGILHEGTGQKLLLSEAIVQGIVPSH
TAVKLMEKLNMFRGFFDSKTSESLTTEEVIDEGLMDETLLHNVLNADKAISGVLDPRTHT
LCSVNDAVAVGLLHKETATRILEGQVLTGGIVDLKRGKKLSVTLASNLGLVDNAEQTDLI
NLEKASKGRDADKTVRERLIGLQMETTGLVDPENKALLTVVQAIDRGLLEREEAIYFLTK
QLVDGGIIHHISGMRLSVDNAFKHGLIDEDLANQLKKVENLNLQQFFHPETKETLSLPEA
IKLDLVTPEMKREIQEIQALNENLVDIISSQQLTCAEPNKEELLTKKAVLASGMMHGVID
PENCRIIPYSDLVKKCKIDIESGLRYLEVIPFSDIKDGMSDRVLTLSEAIQLGKVDIPST
LKILETQANTGGIIDTATGKRLTLASALEQKLMDEDMARIIASHQVLNGGIIDIFNDQRV
TMQEAVERRLLSPELAAALTSHDDGAHIEKQDEIQVCEVNNEFLKKAMLTACNQTAEVSC
DKGDHDRFLEIESQSTQGKVKVRDSVGEMAKRSRKSSLKEVDSKDQDEGRIRGAKGAVNI
IIHGNLKGKSSDQVSVMHTYSEPSDLTLDELAKNHLGKNTDVEQEKVVSPTEMIIHIKQS
TSGLDVEEARKSLREIASEVQESNHETSGNLLSEQPVNTRVKSKREKREMIVKESAQTCK
PAVLSEAELNQKTTIGDVYDFQSVEMNGSETGKETGREMKFSVTCKTEDSCQMTTKEISA
RNQDVPTFFSSTQVSQGEGRNVSLYSTLKPGENLSQETTSGTHSEPFSSGTPKPEVLCKQ
KSVLKAQVTDISQTSKTYRAVQETTRQETNDHQDSYVIIKTKETKDPISIAKKCKEKSYQ
EVPSNSTRALKLEEITVSKVDAKEASCLESSDRKDFYHQESKGDPELCGMLKSKVVTTKE
TNGDRFLEMESPIVMVSLLPEKLHKDRLQKESAELQDTVISPAISELSEETTVSQMSYAT
KKMDQKTPQKRVRDSPSNEQAPFMAVPGGKGSEGVNPEAFRATQNVLNRQLCLEHDEKLV
SYLSLLRDIEMRTKQIQPLELNLTELQNLLCRAKVLDKELKDLSNLVSQELECVDQIINS
QPQEVPAQLLKALEKDAKSLQKSLSSVSDHWNSRLFHLQNAMEVKKTTVLSQHMQLEEKL
QDLRTWVGNANLILNSKEYDNKTDVISLNHSLQHYENMKQSVEEKKSQLDTLAFDIQFFI
SEHAQDLSPQQNRQILRLLNELQRSFQDLVERIAAQIDALQAHVQQTKQESQTLQKQQNT
CHQKLEDLCSWVGQAEKALVSHRGRASPQDLSALQKNQSDLKDLQDNIQNRATSFTTVVK
DIEGFLEENQTKLSPSELTALQEKLHQAKEQYKALQERTQMAQKEVQEAVSSALQQETEK
SKAAKELAENKSKIDALLDWVTSMESSGEQLQTRLPGIEQLSGAKLEKRALDTTDSYMGM
NQAPEKLDKQCETMKARHQELLSQQQNFIVATQSAQAFLDQQGHNLTPEERQMLQEKLGE
LKEQYASSLAQSEVELKQVQTLRDELQKFLQDYTEFESWLERSEKELENMHKGVNGPEAL
PSLLKRQGSFSEDVISHKGDLRFVTISGQKVLDTENNFEESKEPSTTRNLVKEKLKDATE
RYTALHSKCTRLGSHLNMLLGQYQQFQSSADILQAWIQTCKAKVDQLLSDTIASDPGILQ
QQLTTTKQLQEELAEHQVPVEKLQKVACDLMKIEGEPALNPQCVQETTDSILSCFQSLSC
SLAERSALLQKAIAQSQSVQESLESLLQSIKEVEQNLQGEQVASLSSGVIQEALANNMKL
KQDIARQKSSLEATHEMVTQFMEKADSTTAAVLQGKLAEVSQSFEQLWLQQQEKESTLKK
LLPQAEMFEQLSDKLQQFMENKSRMLASGNQPDQDIAHFSQQIQELTLEMEDQQESLNAL
EDLVTALNSCGLALDLSQHQDRVQNLRKDFTLLQKTVQEREKDASSCQEQLDEFRKLIRT
FQKWLKETEGNVPPTETFISAKELEKQIEHLKGLLDDWKSKGTLVEEINCKGTSLESLIM
EITAPDSQVKTGSILPSVGSSIGSVNGYHTCKDLTEIQCDMSDVNLKYEKLGRMLQERQE
NLQTVLNRMGDIQKEASSVLQWLESKEEVLKAMDASLSPSKTETVKAQAESNKAFLTELE
QNSPKIQKVKEALAELLVTYPNSQEAENWKKMQEELNSRWERATEVTVARQKQLEESANH
LACFQAAESQLRPWLMEKELMMGVLGPLSIDPNMLNAQKQQVQFMLKEFEARRQQHEQLN
EAAQGILTGPGDVSPSTSQVQKELQSINQKWIELTDKLNSRSSQIDQALVKSTQYQELLQ
DLSEKVKAVGHRLSSQSAISTQPEAVKQQLEETSEIRSDLEQLDCEMKEAQTLCDELSLL
IGEPYLKDELKKRLDTVALPLQGLEDLAADRMNRLQAALASTQQFQQMFDELRTWLDDKQ
SQQAKNCPISAKLERLQSQLQENEEFQKSLNQHSGSYEVIVAEGESLLLSVPPGEEKRTL
QNQLVELKSHWEELSKKTADRQSRLKDCMQKAQKYQWHVEDLVPWIEDCKNKMSELQVTL
DPVQLESGLLRSKAMLNDVEKRRSLLEILNSAADILINSSETDEDGIRDEKAGINQSMDA
ITEELQAKTGSLEEMTQRLKEFQESFKNIEKKVEGAKHQLEIFDALGSQACSNKNLEKLR
AQQEVLQALEPQVDYLRNFTQGLVEDAPDGSDASQLLHQAEVTQQEFLEVKQRVNSSCMM
MENKLEGIGQFHCRVREMFSQLADLDDELDGMGAIGRDTDSLQSQIEDVRLFLNKIQVLR
LDIEASEAECRQMLEEEGTLDLLGLKRELEALNKQCSKLTERGKARQEQLELTLSRVEDF
YRKLKVLNDATTAAEEGEALQWVVATEVDVINQQLADFKMFQKEQVDPLQMKLQQVNGLG
QGLIQSAGKNCDVQGLEHDMDEINARWNTLNKKVAQRIAQLQEALLHCGKFQDALEPLLS
WLADTEELIANQKPPSAEYKVVKAQIQEQKLLQRLLDDRKATVDMLQAEGGRIAQSAELA
DREKITGQLESLESRWTELLSKAAARQKQLEDILVLAKQFHETTEPISDFLSVTEKKLAN
SEPVGTQTAKIQQQIIRHKALKEEIENHATDVHQAVNIGQSLSSLTCPAEQGVLSEKLDS
LQARYSEIQDRCCRKAALFEQALCNARLFGEDEVEVLNWLAEVEDKLSSVFVKDYRQEVL
QKQHADHLALNEEIVNRKKNVDQAIKNGQALLKQTTGEEVLLIQEKLDGIKTRYTDITVA
SSKALRTLEQARQLATKFQSTYEELTGWLREVEEELAASGGQSPTGEQIPQFQQRQKELK
KEVMEHRLVLDTVNEVSRALLELVPWRAREGLDKLVSDANEQYKLVSDTVGQRVDEIDAA
IQRSQQYEQAADAELAWVAETKRKLMALGPIRLEQDQTTAQLQVQKAFSIDIIRHKDSMD
ELFSHRGEIFGTCGEEQKAVLQEKTECLIQQYEDISLLNSERYARLERAQVLVNQFWETF
EELSPWIEETRALIAQLPPPAIDHEQLRQQQEEMRQLRESIAEHKPHIDKLLKIGPQLKE
LNPEEGKMVEEKYQKAENMYAQIKEEVRQRALALDEAVSQSAQITEFHDKIEPMLETLEN
LSSRLRMPPLIPAEVDKIRECISDNKSATMELEKLQPSFEALKRRGEELIGRSLGADKDL
AAKEIQDKLDQMVFFWEDIRARAEEREIKFLDVLELAEKFWYDMAALLTTIKDTQDIVHD
LESPGIDPSIIKQQVEAAETIKEETDGLHEELEFIRILGADLIFACGETEKPEVKKSIDE
MNNAWENLNKTWKERLDKLEDAMQAAVQYQDTLQAMFDWLDNTVIKLCTMPLVGTDLNTV
KDQLNEMKEFKVEVYQQQIEMEKLNHQGELMLKKATDETDRDIIREPLTELKHLWENLGE
KIAHRQHKLEGALLALGQFQHALEELMSWLTHTEELLDAQRPINGDPKVIEVELAKHHVL
KNDVLAHQATVETVNKAGNELLESSAGDDASSLRSRLETMNQCWESVLQKTEEREQQLQL
TLQQAQGFHSEIEDFLLELTRMESQLSASKPTGGLPETAREQLDSHMELYSQLKAKEETY
NQLLDKGRLMLLSRDDSGSGSKTEQSIALLEQKWHVVSSKMEERKSKLEEALNLATEFQN
SLQEFINWLTLAEQSLNIASPPSLILNTVLSQIEEHKVFANEVNAHRDQIIELDQTGNQL
KFLSQKQDVVLIKNLLVSVQSRWEKVVQRSIERGRSLDDARKRAKQFHEAWKKLIDWLED
AESHLDSELEISNDPDKIKLQLSKHKEFQKTLGGKQPVYDTTIRTGRALKEKTLLADDAQ
KLDNLLGEVRDKWDTVCGKSVERQHKLEEALLFSGQFMDALQALVDWLYKVEPQLAEDQP
VHGDLDLVMNLMDAHKVFQKELGKRTGTVQVLKRSGRELIENSRDDTTWVKGQLQELSTR
WDTVCKLSVSKQSRLEQALKQAEEFRDTVHMLLEWLSEAEQTLRFRGALPDDTEALQSLI
DTHKEFMKKVEEKQVDVNAAVAMGEVILAVCHPDCITTIKHWITIIRARFEEVLTWARQH
QQRLETALSELVANAELLEELLAWIQWAETTLIQRDQEPIPQNIDRVKALIAEHQTFMEE
MTRKQPDVDRVTKTYKRKNVEPTHAPFIEKSRSGSRKSLSQPTPPPMPILSQSEAKNPRI
NQLSARWQQVWLLALERQRKLNDALDRLEELKEFANFDFDVWRKKYMRWMNHKKSRVMDF
FRRIDKDQDGKITRQEFIDGILASKFPTTKLEMTAVADIFDRDGDGYIDYYEFVAALHPN
KDAYRPTTDADKIEDEVTRQVAQCKCAKRFQVEQIGENKYRFFLGNQFGDSQQLRLVRIL
RSTVMVRVGGGWMALDEFLVKNDPCRARGRTNIELREKFILPEGASQGMTPFRSRGRRSK
PSSRAASPTRSSSSASQSNHSCTSMPSSPATPASGTKTLFQLSRCYDKPWLVNSKAGTPV
RDSPCPDLQLLSPEVIPSTGSKLKRPTPTFHSSRTSLAGDTSNSSSPASTGAKANRADPK
KSASRPGSRAGSRAGSRASSRRGSDASDFDLLETQSACSDTSESSAAGGQGNSRRGLTKP
SKIPTMSKKTTAASPRTPGPKR
Download sequence
Identical sequences A0A1S3F7Q4
XP_012872295.1.60039

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