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Domain assignment for XP_014972404.1.72884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_014972404.1.72884
Domain Number 1 Region: 266-413
Classification Level Classification E-value
Superfamily TRAF domain-like 1.24e-46
Family MATH domain 0.00000132
Further Details:      
 
Weak hits

Sequence:  XP_014972404.1.72884
Domain Number - Region: 86-110
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0111
Family SIAH, seven in absentia homolog 0.01
Further Details:      
 
Domain Number - Region: 227-262
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.0863
Family Trimerization domain of TRAF 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_014972404.1.72884
Sequence length 416
Comment PREDICTED: TNF receptor-associated factor 1 isoform X1 [Macaca mulatta]; AA=GCF_000772875.2; RF=representative genome; TAX=9544; STAX=9544; NAME=Macaca mulatta; AL=Chromosome; RT=Major
Sequence
MASSSGSSPRPAPDENEFPFGCPPTVCRDPKEPRALCCTGCLSENLRNSEDQICPKCRGE
DLQSVSPGSRLRTLERAHPEVAEAGVGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLL
GFMKQWKTRLGSGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQH
FMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQ
QTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAK
YGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAID
AFRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETST
Download sequence
Identical sequences A0A2K6E357 F7GHV4 G7PRJ4
ENSMMUP00000026496 9544.ENSMMUP00000026496 NP_001252822.1.72884 XP_005580973.1.63531 XP_005580974.1.63531 XP_005580975.1.63531 XP_011748769.1.29376 XP_011748770.1.29376 XP_014972403.1.72884 XP_014972404.1.72884 XP_014972405.1.72884 XP_015292263.1.63531 XP_015292264.1.63531 ENSMMUP00000026496

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