SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_015992616.1.101085 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_015992616.1.101085
Domain Number 1 Region: 5-47
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 0.0000000000000654
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.00056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015992616.1.101085
Sequence length 452
Comment PREDICTED: TFIIA-alpha and beta-like factor isoform X2 [Rousettus aegyptiacus]; AA=GCF_001466805.2; RF=representative genome; TAX=9407; STAX=9407; NAME=Rousettus aegyptiacus; AL=Scaffold; RT=Major
Sequence
MAYVNSVPKLYRSVIEDVIEGVRNLFAEEGIEEQVLKDLKELWETKVLQSKATEDFFRNS
VHSPLFTLQLPHGLHQTLQSSTASLVIPAGRTLPSFTTAELGASNSSANFTFPGYPIHVP
ADVALQTASGHLYKVNVPIMVTQASGRASILQHPIQVFQQLGQPSVIQTSVPRLNPCSLQ
AATEKSQRMETVFQQPTILHSGTVDRKPLENATSDILITPGNEHKIMSEALLSQPEGSQY
VSLPGVVFPPQVSQTVANVGPLLHVSANVTQNLHGGPLPTGLQGAQHQHMSDVQLHVLKN
RIFGYDCVKQPRRIEEPSSLSVSDKDSKSQMVLSIQGTDDDVNEIIQIDGTGDTSSNDEI
GSSRDVDENEFLGIIDGGDLKVLEEEADSISNGGSAANSSDNEDPQIDIVEEDPLNSGDD
VSEQDAPDLFDTDNVIVCQYDKMRKLRTTEVN
Download sequence
Identical sequences XP_015992615.1.101085 XP_015992616.1.101085

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]