SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_017135465.1.22881 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_017135465.1.22881
Domain Number 1 Region: 54-181
Classification Level Classification E-value
Superfamily Plus3-like 6.02e-35
Family Plus3 0.00024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_017135465.1.22881
Sequence length 250
Comment PREDICTED: RNA polymerase-associated protein Rtf1 [Drosophila miranda]; AA=GCF_000269505.1; RF=representative genome; TAX=7229; STAX=7229; NAME=Drosophila miranda; strain=MSH22; AL=Chromosome; RT=Major
Sequence
MNRKAKPSLRIEKSRRPISEIAQELRRLKASPLRIDDEKELLKPSVSDRPVKRLDQLEPL
RLTRHRITQLLVRPAFEQAVTSCFVRVNINGQGEQSEYRIAEIVGIEELGLGYFVDGIPT
NITLRLRYHCEVMPHELNDISNMAFTLPEFQLWYDYCVNQGISPPTNSLIARKKIELYNA
LQSEAKSLALIKQTCSLNMRPAHRGGILERHGATYPWHLQHPTEATPSTLKPPSNQNEEL
KVELELDESG
Download sequence
Identical sequences XP_017135465.1.22881

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]