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Domain assignment for XP_017262959.1.84151 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_017262959.1.84151
Domain Number 1 Region: 366-514
Classification Level Classification E-value
Superfamily TRAF domain-like 3.27e-50
Family MATH domain 0.0000002
Further Details:      
 
Domain Number 2 Region: 326-364
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.000000000000392
Family Trimerization domain of TRAF 0.0021
Further Details:      
 
Domain Number 3 Region: 22-72
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000118
Family RING finger domain, C3HC4 0.01
Further Details:      
 
Domain Number 4 Region: 158-257
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000157
Family SIAH, seven in absentia homolog 0.0075
Further Details:      
 
Domain Number 5 Region: 98-157
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000019
Family SIAH, seven in absentia homolog 0.009
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_017262959.1.84151
Sequence length 516
Comment PREDICTED: TNF receptor-associated factor 2 isoform X1 [Kryptolebias marmoratus]; AA=GCF_001649575.1; RF=representative genome; TAX=37003; STAX=37003; NAME=Kryptolebias marmoratus; AL=Scaffold; RT=Major
Sequence
MARISLDCPNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACQQEEIYEEPMSILNSNEAFPDNAAGREIASLPARCLNQGCSWTGSIKEYEAQ
HEGRCEYERVQCEACQASVLLKDKDRHNERECEERTLNCKYCKMTFNFKEIKAHDEICLK
FPLQCKDCGKKKIPREKFGDHVKSCAKSKSACPFSEVGCKSVIENGKINEHEHSSTMEHL
RLLLPMVLSMTRARSEPAGSSEWQEDSGLGLYRAPEEGSGAAVSTHSVDLEKKVSALENI
VCVLNREVERSSVTLEAFAHQHRLDQEKIENLSNRVRQLERTVTMRDLQLSETEQLLREL
QHCTFDGVFVWKITDFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGT
HLSLFFVVMKGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDITSTSFQRPISEMNI
ASGCPLFCPLPKLAGKSPYLRDDTIFIKAIVDLTGL
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Identical sequences XP_017262958.1.84151 XP_017262959.1.84151 XP_017262960.1.84151 XP_017262961.1.84151

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