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Domain assignment for XP_019091363.1.75697 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_019091363.1.75697
Domain Number 1 Region: 322-375
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), beta-barrel domain 1.57e-18
Family Transcription factor IIA (TFIIA), beta-barrel domain 0.0008
Further Details:      
 
Domain Number 2 Region: 5-49
Classification Level Classification E-value
Superfamily Transcription factor IIA (TFIIA), alpha-helical domain 0.0000000000288
Family Transcription factor IIA (TFIIA), alpha-helical domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_019091363.1.75697
Sequence length 384
Comment PREDICTED: transcription initiation factor IIA subunit 1-like isoform X1 [Camelina sativa]; AA=GCF_000633955.1; RF=representative genome; TAX=90675; STAX=90675; NAME=Camelina sativa; cultivar=DH55; AL=Chromosome; RT=Major
Sequence
MGTTTTTSAVYIQVIEDVVNKVREEFINNGGPGESVLSELQGIWETKMMQAGVLNGPIER
SSAQKPTPGGPLTHDLNVPYEGTEEYETPTAEMLFPPTPLQTPLPTPLPGTADNSSMYNI
PTGGSSDYPTPGTDNGSNADIKGRPSPYMPPPSPWTNPSPRLDVNVAYVDGRDEPERGNS
NQQFTQDLFVPSSGKRKRDDSSAPYQNGGSIPQQDGASDAIPKANFECAALRITYVGNRK
VPRDFICSSSKIPQVDGPMPDPYDEMLSTPNIYSYQGPNEEFNEARTPAPNEIQTSTPVA
VQNDVIDDDEELLNEDDDDDELDDLESGEDMNTQHLVVAQFDKVTRTKSRWKCSLKDGIM
HINDKDILFNKVICASQISLVLFW
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Identical sequences XP_019091363.1.75697

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