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Domain assignment for XP_020141223.1.48125 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_020141223.1.48125
Domain Number 1 Region: 414-564
Classification Level Classification E-value
Superfamily TRAF domain-like 2.62e-50
Family MATH domain 0.0000000357
Further Details:      
 
Domain Number 2 Region: 364-413
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 3.14e-20
Family Trimerization domain of TRAF 0.0000865
Further Details:      
 
Domain Number 3 Region: 112-211
Classification Level Classification E-value
Superfamily TRAF domain-like 5.17e-17
Family SIAH, seven in absentia homolog 0.014
Further Details:      
 
Domain Number 4 Region: 42-99
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000707
Family RING finger domain, C3HC4 0.01
Further Details:      
 
Domain Number 5 Region: 212-253
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000177
Family SIAH, seven in absentia homolog 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_020141223.1.48125
Sequence length 568
Comment TNF receptor-associated factor 3 isoform X1 [Microcebus murinus]; AA=GCF_000165445.2; RF=representative genome; TAX=30608; STAX=30608; NAME=Microcebus murinus; AL=Chromosome; RT=Major
Sequence
MESSKKMDSAGPLQTNPPLKLHPDRSAGTSVFVPEQGGYKEKFVKAVEDKYKCEKCRLVL
CNPKQTECGHRFCETCMAALLSSSSPKCTACQESIIKDKVFKDNCCKREILALQIYCRNE
SRGCAEQLTLGHLLVHLKNDCQFEELPCARADCKEKVLRKDLRDHVEKACKYREATCSHC
KSQVPMITLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCV
FQGTNQQIKAHEASSAVQHVNLLKEWSSSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI
EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR
VTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW
KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG
EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ
TVLENGTYIKDDTIFIKVIVDTSDLPDP
Download sequence
Identical sequences XP_012601824.1.48125 XP_012601826.1.48125 XP_012601827.1.48125 XP_012601828.1.48125 XP_012601830.1.48125 XP_012601831.1.48125 XP_020141223.1.48125

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