SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for NP_000317.1.92137 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  NP_000317.1.92137
Domain Number 1 Region: 41-306
Classification Level Classification E-value
Superfamily PDB 5.1e-88
Family PDB 0.000000000188
Further Details:      
Domain Number 2 Region: 140-297
Classification Level Classification E-value
Superfamily CRAL/TRIO domain 1.54e-61
Family CRAL/TRIO domain 0.0014
Further Details:      
Domain Number 3 Region: 46-124
Classification Level Classification E-value
Superfamily CRAL/TRIO N-terminal domain 5.05e-18
Family SCOPe 0.046
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_000317.1.92137
Sequence length 317
Comment retinaldehyde-binding protein 1 [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Download sequence
Identical sequences A0A2K5HRF4 P12271
9606.ENSP00000268125 4ciz_A ENSP00000268125 NP_000317.1.87134 NP_000317.1.92137 XP_011520172.1.92137 XP_011803708.1.43180 GO.38705 gi|4506541|ref|NP_000317.1| ENSP00000268125 ENSP00000268125

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]