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Domain assignment for NP_001020038.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001020038.1.100692
Domain Number 1 Region: 326-382
Classification Level Classification E-value
Superfamily Endosomal sorting complex assembly domain 0.0000000000324
Family VPS37 C-terminal domain-like 0.013
Further Details:      
 
Domain Number 2 Region: 62-130
Classification Level Classification E-value
Superfamily UBC-like 0.00000000197
Family UBC-related 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001020038.1.100692
Sequence length 398
Comment vacuolar protein sorting-associated protein 37A [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MSWLFPLTKSASSSAAGSPAGLTSLQQQKQRLIESLRNSHSSIAEIQKDVEYRLPFTVNN
LTININILLPPQFPQEKPVISVYPPIRHHLMDSQGLYVTSPLVSNFTMHSDLGKIIQSLL
DEFWKNPPVLAPTSTTFPYLYSNPGGMPPYPSQGFPFLPSYPPQEAASRSITSLSVADTV
SSSTTSYTAAKPVAPSFGILSSLPLPVPTTESSASINQNGFGYKMPDIPDAFPELSELSV
SQLTDMNEQEEVLLEQFLMLPQLKQIITDKEDLVKSIEELARKNLLLEHSLETKRQAVLD
KYELLIQMKSTFEKKMQRQHELSESCSASALQARLKVAAHEAEEESDNIAEDFLEGKTEI
DDFLNSFKEKRTICHCRRAKEEKLHQVIAMHSQFHAPL
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Identical sequences Q4V794
ENSRNOP00000016321 ENSRNOP00000016321 NP_001020038.1.100692 NP_001020038.1.4139 10116.ENSRNOP00000016321

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