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Domain assignment for NP_001037702.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001037702.1.100692
Domain Number 1 Region: 93-179
Classification Level Classification E-value
Superfamily PUA domain-like 1.06e-18
Family PUA domain 0.0039
Further Details:      
 
Weak hits

Sequence:  NP_001037702.1.100692
Domain Number - Region: 51-89
Classification Level Classification E-value
Superfamily Pre-PUA domain 0.0915
Family Hypothetical protein APE0525, N-terminal domain 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001037702.1.100692
Sequence length 182
Comment malignant T-cell-amplified sequence 1 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MGKGRFDEKENVSNCIQLKTSVIKGIKNQLLEQFPGIEPWLNQIMPKKDPVKIVRCHEHI
EILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSP
GAKLYPAAVDTIVAIMAEGKQHALCVGVMKMSAEDIEKVNKGIGIENIHYLNDGLWHMKT
YK
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Identical sequences Q4G009
ENSRNOP00000061717 ENSRNOP00000061717 10090.ENSMUSP00000110768 10116.ENSRNOP00000061717 ENSTTRP00000006823 ENSTTRP00000006823 ENSMUSP00000110768 NP_001037702.1.100692 NP_001037702.1.4139 XP_006541598.1.92730 XP_007122107.1.24612 XP_007464484.1.90284 XP_021043721.1.100879

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