SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for NP_001078620.1.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001078620.1.80155
Domain Number 1 Region: 13-115
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000000000000275
Family B3 DNA binding domain 0.0063
Further Details:      
 
Domain Number 2 Region: 180-268
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.00000000129
Family B3 DNA binding domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001078620.1.80155
Sequence length 282
Comment AP2/B3-like transcriptional factor family protein [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MLPKNAIEKIQANVSKPCFWKSLSPGQTWKSKSMRIIPEDFVRRTRGAFEHRVVFSVRWE
NSWQLWLEREKNELFMIEEDWNEFVDDNHLGPNDNLFIKHDETMNLEVQIFKNNGVEIID
VPLGVEPETEPFHPTPKKPHKETTPASSFASGSGCSANGGTNGRGKQRSSDVKNPERYLL
NPENPYFVQAVTKRNDVLYVSRPVVQSYRLKFGPVKSTITYLLPGEKKEEGENRIYNGKP
CFSGWSVLCRRHNLNIGDSVVCELERSGGVVTAVRVHFVKKD
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Identical sequences Q680D9
AT5G25475.1 AT5G25475.2 AT5G25475.3 NP_001078620.1.80155 NP_568473.1.80155 NP_851075.1.80155 3702.AT5G25475.1-P

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