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Domain assignment for NP_001137345.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001137345.1.76553
Domain Number 1 Region: 573-729
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.25e-34
Family MAM domain 0.00097
Further Details:      
 
Domain Number 2 Region: 887-1051
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 6.17e-32
Family MAM domain 0.0024
Further Details:      
 
Domain Number 3 Region: 63-220
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.44e-28
Family MAM domain 0.01
Further Details:      
 
Domain Number 4 Region: 732-885
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.01e-27
Family MAM domain 0.0014
Further Details:      
 
Domain Number 5 Region: 270-423
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.06e-18
Family MAM domain 0.013
Further Details:      
 
Domain Number 6 Region: 224-263
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000157
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 7 Region: 487-571
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 0.000000253
Family MAM domain 0.01
Further Details:      
 
Domain Number 8 Region: 453-492
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000275
Family LDL receptor-like module 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001137345.1.76553
Sequence length 1133
Comment apical endosomal glycoprotein precursor [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MPLHGHLLPAVVMLLAGSPGWAWVPNHCRTPREAVCNFVCDCRGCPDEAQCGYHGTSPSL
GTPFTCDFERDSCGWRDISTAGYRWLRDRAGASPERPGLRADHTLGTDLGWYVAVGTHRG
RETATAALRSPVLHEAAPTCELRLWYHVASGDVAELRLELTHGVETLTLWQSAGPWDPDW
QELAVPTGRIRGAFRVTFSATRNATHRGTVALDDVAFWRCGLPTPQAHCPRGHHRCQNEA
CVEPAQLCDGEDNCGDHSDEDAAPCRHYIATDFEMGLGLWNHSEGWTRNHSAGGPRYPAW
PRGDHTWNSAQGSFLASVAEPSTPAVLSSPEFQASAPHNCSLVFYHYLHGSEAGCLQVFL
QTASPAAPQTPVLLRRRHGELGAAWVRDRVDIQSEHPFRILLAGQTGPGGVVGLDDLILS
NHCKPIPELAGPPPGCWAPGPWPQPPSLRPRSFCEPGHFFCGDLCVPPEQLCDFQQQCPG
GEDEQECGTTDFESLSGGGWEDASVGRLQWVRLPAPDRGMPSPDAHGAAGHFLAVQRAWG
QLAEEARALTPTLGPSGPRCELRLVYYLQSHPREVSCNFERGACGWHTGHLTDAHWHRVE
SRGPRYDHTTGQGHFVLLDPVDPPARGPAAHLLTQPRVPSAPQECLSFWFHLFGPQIGTL
RLAMRREGEAETHLWSRSGTHGNCWHEAWATLHHQPDSGAKYQLLFEGLRDGYHGSMALD
DVTLRPGPCWAPRRCSFEDSACGFSVGGRGLWTRQANASWGPHADHTTETAQGHYMVVDM
SPQALPRGHAALLTSEEQRPLVQPTCLTFWYHLSLRNPGTLRVHVEEAGRQQVLSVSSRG
GAAWRLGSVDLQAGQAWRVVFEAVAAGVEHSYVALDDLLLQDGPCPLPASCDFEAGLCGW
NHVPRPGLGGYSWDWSSGASPSRYPQPPVDHTLGTEAGHFALFETSVLGPGGRAAGLISQ
PLPPTTASCLRFWYHMGFPEHFYQGELRVLLSSAQGQLAVWGAGGRHRHQWLEGQVDVAS
AREFQIVFEATLGGQPALGPIALDDVEYLAGQRCQLSTPSQGDGAAAAVVPAAVGGTLLL
LVLLMLLGVAGRRWLQKGGCPSWGKADTVTPGFDNILFSADRVTLPASVPHDQ
Download sequence
Identical sequences F1MKB1
ENSBTAP00000032513 ENSBTAP00000032513 NP_001137345.1.59421 NP_001137345.1.76553

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