SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001178792.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001178792.1.4139
Domain Number 1 Region: 29-144
Classification Level Classification E-value
Superfamily FKBP-like 1.02e-42
Family FKBP immunophilin/proline isomerase 0.000000716
Further Details:      
 
Domain Number 2 Region: 259-414
Classification Level Classification E-value
Superfamily TPR-like 9.97e-34
Family Tetratricopeptide repeat (TPR) 0.000000127
Further Details:      
 
Domain Number 3 Region: 142-256
Classification Level Classification E-value
Superfamily FKBP-like 4.12e-28
Family FKBP immunophilin/proline isomerase 0.00000117
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001178792.1.4139
Sequence length 458
Comment peptidyl-prolyl cis-trans isomerase FKBP4 [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MTAEEMKVAENGAQSAPLPLEGVDISPKQDEGVLKVIKREGTGTETAMIGDRVFVHYTGW
LLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPP
KIPPNATLVFEVELFEFKGEDLTEDEDGGIIRRIRTRGEGYARPNDGAMVEVALEGYYND
RLFDQRELCFEVGEGESLDLPCGLEEAIQRMEKGEHSIVYLKPSYAFGSVGKERFQIPPH
AELRYEVHLKSFEKAKASWEMNSEEKLEQSNIVKERGTVYFKEGKYKQALLQYKKIVSWL
EYESSFSGEEMQKVHALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRG
EAHLAVNDFDLARADFQKVLQLYPSNKAAKTQLAVCQQRTRRQLAREKKLYANMFERLAE
EEHKAKTEVAAGDHPTDAEMKGEPNNVAGNQAQVKTEA
Download sequence
Identical sequences Q9QVC8
NP_001178792.1.100692 NP_001178792.1.4139 ENSRNOP00000008737

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]