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Domain assignment for NP_001189594.1.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001189594.1.80155
Domain Number 1 Region: 234-337
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.1e-22
Family B3 DNA binding domain 0.007
Further Details:      
 
Domain Number 2 Region: 129-228
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.02e-20
Family B3 DNA binding domain 0.01
Further Details:      
 
Domain Number 3 Region: 3-102
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.14e-19
Family B3 DNA binding domain 0.0034
Further Details:      
 
Domain Number 4 Region: 381-483
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 2.16e-18
Family B3 DNA binding domain 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001189594.1.80155
Sequence length 490
Comment Transcriptional factor B3 family protein [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MANQHFFKPLLPGFHTHLRIPVAFFLKNIEGRYEQKTAELRSDASKITWEVKIDGQRLTD
GWKEFALSHDLRIGDIVVFRQERDMSFHVTMLGPSCCEIQYGSCSDEERNLEKKKNPNGE
AKSSSLDPSCFSANVAPSSLRYDLMLFPMGFVRENGVVGSGKIVLMNEKGRSWNFNLRQK
PSCGTVYVRGGWVSFCDANGLQAGDIYTFKLIKRGGTLVLRLLPKGAESCSLDPSCFVAN
VAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKGKSWTLDLKLKKSCGTSLIRRGWR
SFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEPEEEVCSEANEVESLSTDQESHEESSH
NEKISRRKEKKGRMIWKASSSPSENRFVTLNLTPYNILRSALRLPIPFTRMNGINEETKM
TLLDKHGMKWLTTLRLVDYKRKRLGMVGGWKGFIQANGVKANESIMLELIWEEETSCVLK
FCSKVKLAIK
Download sequence
Identical sequences A0A178VUI0 Q8GYM4
AT2G24645.1 AT2G24645.1 NP_001189594.1.80155

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