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Domain assignment for NP_037039.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_037039.1.4139
Domain Number 1 Region: 54-157
Classification Level Classification E-value
Superfamily Cytidine deaminase-like 0.0000421
Family Cytidine deaminase 0.089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_037039.1.4139
Sequence length 229
Comment C-_U-editing enzyme APOBEC-1 [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MSSETGPVAVDPTLRRRIEPHEFEVFFDPRELRKETCLLYEINWGGRHSIWRHTSQNTNK
HVEVNFIEKFTTERYFCPNTRCSITWFLSWSPCGECSRAITEFLSRYPHVTLFIYIARLY
HHADPRNRQGLRDLISSGVTIQIMTEQESGYCWRNFVNYSPSNEAHWPRYPHLWVRLYVL
ELYCIILGLPPCLNILRRKQPQLTFFTIALQSCHYQRLPPHILWATGLK
Download sequence
Identical sequences P38483
ENSRNOP00000020735 10116.ENSRNOP00000020735 ENSRNOP00000020735 NP_037039.1.100692 NP_037039.1.4139 XP_006237352.1.100692 XP_006237353.1.100692 XP_006237354.1.100692 XP_006237355.1.100692 XP_017447973.1.100692

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