SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for NP_068526.1.4139 from NCBI 2017_08 genome

Domain architecture

Domain assignment details

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Strong hits

Sequence:  NP_068526.1.4139
Domain Number 1 Region: 88-182
Classification Level Classification E-value
Superfamily PDZ domain-like 4.6e-30
Family PDZ domain 0.011
Further Details:      
Domain Number 2 Region: 9-63
Classification Level Classification E-value
Superfamily L27 domain 2.79e-23
Family L27 domain 0.0000532
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_068526.1.4139
Sequence length 207
Comment protein lin-7 homolog B [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
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Identical sequences Q9Z252
ENSRNOP00000028164 ENSRNOP00000028164 NP_068526.1.100692 NP_068526.1.4139 XP_006986333.1.50099 XP_008843250.1.79516 XP_021077735.1.100879 XP_021512309.1.76796 XP_021512312.1.76796 10116.ENSRNOP00000028164

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