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Domain assignment for NP_194520.3.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_194520.3.80155
Domain Number 1 Region: 876-1027
Classification Level Classification E-value
Superfamily SET domain 1.44e-44
Family Histone lysine methyltransferases 0.012
Further Details:      
 
Domain Number 2 Region: 199-308
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 1.5e-16
Family PWWP domain 0.003
Further Details:      
 
Domain Number 3 Region: 593-657
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000532
Family PHD domain 0.0084
Further Details:      
 
Domain Number 4 Region: 397-460
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000193
Family PHD domain 0.0059
Further Details:      
 
Weak hits

Sequence:  NP_194520.3.80155
Domain Number - Region: 700-734
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0215
Family PHD domain 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_194520.3.80155
Sequence length 1027
Comment SET domain protein 16 [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MIIKRKFKTQIPSLERCKLGNESRKKKRKLNLGGGGYYYPLNLLGEIAAGIVPGNGRNGF
SASWCTEVTKPVEVEESLSKRRSDSGTVRDSPPAEVSRPPLVRTSRGRIQVLPSRFNDSV
LDNWRKDSKSDCDLEEEEIECRNEKVVSFRVPKATNLKSKELDRKSKYSALCKEERFHEQ
HNDEARARVDEKLPNKKGTFGPENFYSGDLVWAKSGRNEPFWPAIVIDPMTQAPELVLRS
CIPDAACVVFFGHSGNENERDYAWVRRGMIFPFVDYVARFQEQPELQGCKPGNFQMALEE
AFLADQGFTEKLMHDIHLAAGNSTFDDSFYRWIQETAVSNQELNNNAPRQGLLKKHRNPL
ACAGCETVISFEMAKKMKDLIPGDQLLCKPCSRLTKSKHICGICKKIRNHLDNKSWVRCD
GCKVRIHAECDQISDRHLKDLRETDYYCPTCRAKFNFDLSDSEKQNSKSKVAKGDGQMVL
PDKVIVVCAGVEGVYFPRLHLVVCKCGSCGPKKKALSEWERHTGSKSKNWKTSVKVKSSK
LALEDWMMNLAELHANATAAKVPKRPSIKQRKQRLLAFLSETYEPVNAKWTTERCAVCRW
VEDWDYNKIIICNRCQIAVHQECYGARHVRDFTSWVCKACERPDIKRECCLCPVKGGALK
PTDVETLWVHVTCAWFQPEVCFASEEKMEPAVGILSIPSTNFVKICVICKQIHGSCTQCC
KCSTYYHAMCASRAGYRMELHCLEKNGQQITKMVSYCAYHRAPNPDNVLIIQTPSGAFSA
KSLVQNKKKGGSRLISLIREDDEAPAENTITCDPFSAARCRVFKRKINSKKRIEEEAIPH
HTRGPRHHASAAIQTLNTFRHVPEEPKSFSSFRERLHHLQRTEMDRVCFGRSGIHGWGLF
ARRNIQEGEMVLEYRGEQVRGSIADLREARYRRVGKDCYLFKISEEVVVDATDKGNIARL
INHSCTPNCYARIMSVGDEESRIVLIAKANVAVGEELTYDYLFDPDEAEELKVPCLCKAP
NCRKFMN
Download sequence
Identical sequences A0A178UVA2 Q9SUE7
AT4G27910.1 AT4G27910.1 3702.AT4G27910.1-P NP_194520.3.80155

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