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Domain assignment for NP_194891.1.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_194891.1.80155
Domain Number 1 Region: 163-265
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.47e-20
Family B3 DNA binding domain 0.0038
Further Details:      
 
Domain Number 2 Region: 8-103
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000000687
Family B3 DNA binding domain 0.0041
Further Details:      
 
Domain Number 3 Region: 305-401
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.000000000942
Family B3 DNA binding domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_194891.1.80155
Sequence length 512
Comment Transcriptional factor B3 family protein [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MADPLIPSPTNKAFFIIDLSGQKSNPIIPTEFIWNHFNGKIQSTNMKLTSDASDRNWDVK
LDGARFAGGWKDFSVSHSVRDDDLLSFRHDGGMVFHVSPFGRSFSQIQLISSSTSDDDDD
ERTVFDDDEDDDVGDDDDNSISEDDFCSKKISSKKRARKETESSSDKSYLVAHVTPSSLL
RDNMCVLSKFARSNGLDRRECEIDLRDEHEKSWTLLLRHNKKTGQAFMRGGWRSFCRNNG
IKAGSICRFKLVQSGIKPVLQLCPNASSIPEGNSSKARKKRNVSEIEGDEIESENCSETI
PLNQNKILTFDLKPYVFRSCQFFLPASFARENGIVEAGEVTVLNKDGIEWKSHLVNIKGR
DQFYNRGCQDFFVANGVKNVGDPFTLEVIRGGPSPILKICSKVKQAASSDGHKTADRKPR
MTDQAPLAEEQTDNRVEKRAQVTEEGGPSRSTRADPGNLQQKQPCSISDHVKKVKQSIVD
TLTDVRRFQSELKVKEQNLEASLQEIDALGMI
Download sequence
Identical sequences Q9SB79
3702.AT4G31630.1-P NP_194891.1.80155 AT4G31630.1 AT4G31630.1

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