SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for NP_196540.1.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_196540.1.80155
Domain Number 1 Region: 15-120
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.67e-21
Family B3 DNA binding domain 0.0034
Further Details:      
 
Domain Number 2 Region: 213-305
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0000000000000235
Family B3 DNA binding domain 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_196540.1.80155
Sequence length 308
Comment Transcriptional factor B3 family protein [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MASNPDFLWCKEERKQESFFKVLKRSDMSSEDTRAIPYDFVINFSDNELSGDMKFRVQWG
NSWKVKISKNPRFYFMEKSGWEKFVIDNALGDHEFLTFTHKGQMSFTVKIFNKDGKEMMQ
PPQSRASFASSSRVKTEQDVKREEEVLVSSDSRSRGPTTAAETNRGGSYKRKLNFGKKKA
EETQTYKRTERTQNSKRTERVVSKERVYAGEPSSSVAGFKIFISKSYIKSLAIPKPFGNY
MPKEKTRVKIHHPDGEKTWKVVFVVKERGQIFSGGWKRLCKEYPVVFGDTCKFTLITPLE
LLLVVSKP
Download sequence
Identical sequences A0A178UQ85 Q9LXE1
3702.AT5G09780.1-P AT5G09780.1 AR1788 NP_196540.1.80155 AT5G09780.1

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