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Domain assignment for NP_567039.1.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_567039.1.80155
Domain Number 1 Region: 167-232
Classification Level Classification E-value
Superfamily RING/U-box 2.65e-20
Family RING finger domain, C3HC4 0.0048
Further Details:      
 
Weak hits

Sequence:  NP_567039.1.80155
Domain Number - Region: 6-33
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0331
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_567039.1.80155
Sequence length 320
Comment RING/U-box superfamily protein [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAF
SAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNG
AAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIKITQKHLK
SSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSRGSSSSTQ
SSQNRSTNGRENSRRRNIFSNLWPFRSSSSSSTQNRRDTNNTATAEEGHYHHHQQQQQQH
QHQHQQQQSHMGYSGWPFDY
Download sequence
Identical sequences Q94AK4
NP_001030874.1.80155 NP_567039.1.80155 NP_974448.1.80155 AT3G56580.1 AT3G56580.1 AT3G56580.2 AT3G56580.3 3702.AT3G56580.3-P

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