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Domain assignment for WP_000115826.1.69157 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_000115826.1.69157
Domain Number 1 Region: 420-664
Classification Level Classification E-value
Superfamily EAL domain-like 6.15e-70
Family EAL domain 0.0034
Further Details:      
 
Domain Number 2 Region: 136-235
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 3.66e-17
Family Heme-binding PAS domain 0.049
Further Details:      
 
Domain Number 3 Region: 699-817
Classification Level Classification E-value
Superfamily CBS-domain pair 0.00000000187
Family CBS-domain pair 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_000115826.1.69157
Sequence length 818
Comment diguanylate phosphodiesterase [Vibrio cholerae]; AA=GCF_000299495.2; RF=na; TAX=1225781; STAX=666; NAME=Vibrio cholerae VC35; strain=VC35; AL=Contig; RT=Minor
Sequence
MSVNVSTVQPQSIGLQTRYAPLDWCYQLASQHMDYDVVMWQSLVGNSRSITKPDDFLEYL
PLTQREHAAGFLVQADSAPQSLNTLLVSAEKLVALVEFSVDEVSSQFVRGTITPLLIFHS
GMESAFAFDALFDNDHHGVVITDDQTRILACNRYFEQQTGYQQNELLGLKTSMFNSGKHS
QHFYVDMWQQLREQGGWSGTILSQRASGEAWPQDLSIKRLSPQKGQIFYIGFTTDLAPHL
ERVLDKQAGDVELLTQLPTLSKFSTQLKQRLPKQQTTTGFVLAIQPKFSSDKYYAQIRRL
AASLAQNRQVQLCGYHGEGIFLCQLDSEKNLEAQPLVGLQRTLRQFFIELRQRGGQEAHQ
AVAKGRLGVSVLNVDTDKIERLVPHAIQAMLEHHAGETRHINFYDRAIHQQIERRKTLEK
WVQKWIANGDVEVFYQPIVDSQSWSVVKFEALCRFQAPEILHASTQELISIAEELGLINQ
LDELIGGKALKDLPKIHALFGHHVGVSINRSLNSDLSAEQILQSVVDMLAQTPTLAKNIT
VELTETAYFDSQSQGGEVLQHLRNRGVTVAIDDFGTGFSSFSYLTECQFDYLKIDREFVT
NIEVGSRRYAIVKMMTDLAHTLGVKVVAEGVETEHEVYVLKSLGVDLLQGFFFAKPLPLS
NLIHASDYRKHLKLTNREADKQSSEITTLQSLAFFTQYRLDPGDPLSLAVEYFNAVQSDV
LPVVTAGECVGLVDRAALNLHLTPTMGTELETAREAAIWRKPVNQIMRTPQVKLAHDTDL
KLLASLLKTNPPPPWVLVEGNKYKGIVTAPRLLAYLAS
Download sequence
Identical sequences WP_000115826.1.69157

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