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Domain assignment for WP_001239827.1.3935 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_001239827.1.3935
Domain Number 1 Region: 6-313
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 2.65e-101
Family TK-like PP module 0.000000317
Further Details:      
 
Domain Number 2 Region: 334-512
Classification Level Classification E-value
Superfamily Thiamin diphosphate-binding fold (THDP-binding) 1.07e-57
Family TK-like Pyr module 0.0000102
Further Details:      
 
Domain Number 3 Region: 516-640
Classification Level Classification E-value
Superfamily TK C-terminal domain-like 2.09e-34
Family Transketolase C-terminal domain-like 0.00062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_001239827.1.3935
Sequence length 641
Comment transketolase [Helicobacter pylori]; AA=GCF_900087965.1; RF=na; TAX=210; STAX=210; NAME=Helicobacter pylori; AL=Contig; RT=Major
Sequence
MRLSNADLERLKSMANALRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKW
LNRDRLVFSGGHASALAYSLLHLWGFDLSLEDLKRFRQLHSKTPGHPELHHTEGIEITTG
PLGQGFANAVGFSMASQYAQNLLDKEAISHKVYCLCGDGDLQEGISYESASLAGHLRLDN
LIVIYDSNQISIEGAINISFSEQVKTRFVAQNWEVLECDGHDYQAIHNALEEAKKSTKPT
LLIAHTIIGKGAVGLEGSEKTHGSPLNKEVLKQSKENAQINPNESFIISPKNKMHFEEVK
VRGVSLEALWEKSLSPKIKEKIHALKDFDFSAIHYPTFKKGESLATRVSNGMILNAIAKE
CEGFLGGSADLAPSNNTQLKHSGDFPLGQNLHFGIREHAMGAITNALAAYGLFVPFCATF
FVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLNHLRALPNFYAFRPS
DAFENTACMQIALSLNAPSGLILSRQNLPVLDEVSKERVLKGAYVKHHSKDPIITLVASG
SEVSLALESAKILERENIQTQVISAPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYR
FADKIIGMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLNA
Download sequence
Identical sequences A0A1Y3E0C9 A0A2J9KI61 O25720
NP_207879.1.64343 WP_001239827.1.100370 WP_001239827.1.12929 WP_001239827.1.14785 WP_001239827.1.15441 WP_001239827.1.15770 WP_001239827.1.16964 WP_001239827.1.18045 WP_001239827.1.21161 WP_001239827.1.21640 WP_001239827.1.23346 WP_001239827.1.26233 WP_001239827.1.26656 WP_001239827.1.27034 WP_001239827.1.29892 WP_001239827.1.30129 WP_001239827.1.32874 WP_001239827.1.32920 WP_001239827.1.32991 WP_001239827.1.34734 WP_001239827.1.34950 WP_001239827.1.37759 WP_001239827.1.3847 WP_001239827.1.3935 WP_001239827.1.45388 WP_001239827.1.45788 WP_001239827.1.46484 WP_001239827.1.47666 WP_001239827.1.51993 WP_001239827.1.53728 WP_001239827.1.54470 WP_001239827.1.56818 WP_001239827.1.5696 WP_001239827.1.58727 WP_001239827.1.61092 WP_001239827.1.63400 WP_001239827.1.64394 WP_001239827.1.65101 WP_001239827.1.65885 WP_001239827.1.66907 WP_001239827.1.6783 WP_001239827.1.71453 WP_001239827.1.71693 WP_001239827.1.74411 WP_001239827.1.7512 WP_001239827.1.76964 WP_001239827.1.77110 WP_001239827.1.77453 WP_001239827.1.78022 WP_001239827.1.78855 WP_001239827.1.79031 WP_001239827.1.79522 WP_001239827.1.81922 WP_001239827.1.84468 WP_001239827.1.85386 WP_001239827.1.85662 WP_001239827.1.85747 WP_001239827.1.87485 WP_001239827.1.88001 WP_001239827.1.88687 WP_001239827.1.8903 WP_001239827.1.94773 WP_001239827.1.95955 WP_001239827.1.97942 WP_001239827.1.98792 WP_001239827.1.98910 WP_001239827.1.990 gi|410024316|ref|YP_006893569.1| gi|15645702|ref|NP_207879.1| 85962.HP1088 gi|410502082|ref|YP_006936609.1| gi|15645702|ref|NP_207879.1|

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