SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_003241689.1.24137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003241689.1.24137
Domain Number 1 Region: 146-264
Classification Level Classification E-value
Superfamily TPR-like 0.0000000000000759
Family Tetratricopeptide repeat (TPR) 0.035
Further Details:      
 
Weak hits

Sequence:  WP_003241689.1.24137
Domain Number - Region: 63-115
Classification Level Classification E-value
Superfamily FlgN-like 0.068
Family FlgN-like 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003241689.1.24137
Sequence length 270
Comment tol-pal system protein YbgF [Pseudomonas mendocina]; AA=GCF_000016565.1; RF=representative genome; TAX=399739; STAX=300; NAME=Pseudomonas mendocina ymp; strain=ymp; AL=Complete Genome; RT=Major
Sequence
MRDCRRILTLLTLALPLAAMAEVPVLESSSMQQGSSYPPAGYGTAGAYAGAGAQAPASAQ
GMLFNQLEQMQQEIAQLRGMLEEQQNEIQRLKQEGLERYQDLDQRISSGAAAGGAPAQNS
ANGAINANGTPTPPAAQQQASAEPGDPAKEKLYYDAAFDLIKAKDFDKASQAFTAFLNRY
PNSQYAGNAQYWLGEVNLAKGDLQAAGQAFAKVSQAYPSHAKVPDSLFKLADVERRLGNN
DKARGILQQVIAQYPGSSAAQLAQRDLQRL
Download sequence
Identical sequences A0A291K9I8 A4XRS8
399739.Pmen_1279 gi|146306311|ref|YP_001186776.1| WP_003241689.1.24137 WP_003241689.1.32543

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