SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_003259457.1.65739 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_003259457.1.65739
Domain Number 1 Region: 4-169
Classification Level Classification E-value
Superfamily ClpP/crotonase 2.7e-27
Family Clp protease, ClpP subunit 0.0064
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003259457.1.65739
Sequence length 183
Comment MULTISPECIES: Clp protease [Pseudomonas]; AA=GCF_001027965.1; RF=na; TAX=303; STAX=303; NAME=Pseudomonas putida; strain=SF1; AL=Contig; RT=Major
Sequence
MARHIVHFTGPINSSTCGNLINTCSRALQQGADVLQLNIATMGGECSYGFTLYNFLRALP
VEVHTHNLGTVESMGNIIFLAGERRTACSYSKFLFHPFHWTLHGSVDHSRMAEYAMSLDY
DLRLYAQIVAERTEGADEVLDVPRYLMAYPRILGPREALANGMIHAIDEMPIEAEACQWS
VHA
Download sequence
Identical sequences A0A1S2JQV1 J8VAG2 V9UY96
WP_003259457.1.1643 WP_003259457.1.23948 WP_003259457.1.28354 WP_003259457.1.56258 WP_003259457.1.65739 WP_003259457.1.7288 gi|568187642|ref|YP_008960249.1| gi|568182264|ref|YP_008954881.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]