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Domain assignment for WP_003668326.1.48856 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003668326.1.48856
Domain Number 1 Region: 207-600
Classification Level Classification E-value
Superfamily beta-lactamase/transpeptidase-like 6.8e-84
Family beta-Lactamase/D-ala carboxypeptidase 0.00000243
Further Details:      
 
Domain Number 2 Region: 64-255
Classification Level Classification E-value
Superfamily Penicillin binding protein dimerisation domain 9.68e-43
Family Penicillin binding protein dimerisation domain 0.0000328
Further Details:      
 
Domain Number 3 Region: 603-658
Classification Level Classification E-value
Superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.000000000000249
Family Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.004
Further Details:      
 
Domain Number 4 Region: 661-714
Classification Level Classification E-value
Superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.00000000000353
Family Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.003
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003668326.1.48856
Sequence length 719
Comment penicillin-binding protein 2B [Lactobacillus reuteri]; AA=GCF_000159475.2; RF=na; TAX=548485; STAX=1598; NAME=Lactobacillus reuteri MM4-1A; strain=MM4-1A; AL=Contig; RT=Major
Sequence
MNKKPQRTKNRGHRENRGTFGKWLFLITVGLFTLFIVRFAYIAINKDVQHVNLRSQAEQI
YTQQRIIQARRGDIYDSEGNPLATDTSKYTLYAVLDRTQKSSDGKPLYVKDRKKTAKVLS
QYIDLTPKQIEKILKPKGQAYQVEFGNAGSNLSVSTMQKIKNRHLPGINFIATPARQYPE
GEFASQIIGMATPKVKNDNGTEETNLVGQLGLEGYFNKQLTGINGLRKDKQDVYGYQIAN
SKQVTKKAINGDNIYTTLDSQTQHFLENKVNKVYKSSNANAMTAVVMEAKTGKIIAATQR
PTLHAENNPVWRNMLVQDAYEPGSVMKILSLAAAIDTGHFNPNATFNSGTWTMGGGKITD
WSSSGWGTISYKDAFDMSSNVGFAHVEQDMGAETWMKYIKRFGLLKKVNVIGMSNEVNGY
TSFKGILAQANTAFGQGITVNVMQMMQAFSAIGNNGKMMKPYIVSKVVDGNSGKTIQKVK
PKVVGQPIKASTAKKVLGYMQGVVYDQKGLGHDYQIKGYRIAGKTATAQIGGAHGYSTGD
TNYLYSFAGMAPAKNPKYIMYVTLRQPQNLKKPATKQIASVFNPTMKMLLSQQKVAEKAK
KKVITMPNVVGQASDEANKELSGKGMQVIVVGSGKKVKQQSAVPDEQVLTDQHVILDTGG
EYKMPDISGWSSADVQQLAKVLKLKVKENGNGYVTQQSISPDTTIKRGTTLTVQYEAKN
Download sequence
Identical sequences A0A1B7LRE7 A5VJ30 C0Z0P7
WP_003668326.1.2821 WP_003668326.1.3665 WP_003668326.1.48856 WP_003668326.1.8717 WP_003668326.1.97761 WP_003668326.1.9821 WP_003668326.1.9859 gi|184153223|ref|YP_001841564.1| 557433.LAR_0568 557436.Lreu_0587 gi|148543821|ref|YP_001271191.1|

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