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Domain assignment for WP_004742978.1.29024 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_004742978.1.29024
Domain Number 1 Region: 428-669
Classification Level Classification E-value
Superfamily EAL domain-like 8.5e-68
Family EAL domain 0.0015
Further Details:      
 
Domain Number 2 Region: 129-239
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.000000000000454
Family N-terminal PAS domain of Pas kinase 0.06
Further Details:      
 
Domain Number 3 Region: 694-822
Classification Level Classification E-value
Superfamily CBS-domain pair 0.000000000000556
Family CBS-domain pair 0.0036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_004742978.1.29024
Sequence length 824
Comment diguanylate cyclase [Vibrio tubiashii]; AA=GCF_000772105.1; RF=representative genome; TAX=1051646; STAX=29498; NAME=Vibrio tubiashii ATCC 19109; strain=ATCC 19109; AL=Complete Genome; RT=Major
Sequence
MYRELGSTQLSSSCEDSSAEKSLDWVWDLEHHQLTIDEALCGQILNSELPSLTGNALLPC
MSYHDQTELLALLAQSGRIRSKERFCCCLQLSDDQCCYVELTFQGLDRYTVTGSITPLLF
VHATTSTLSALFEQLFNNPHHGVVLADSSRKIVACNDYFLTHTHYSNQQLVNQPMDLLNS
TKHSDGFYQKIWQQTEQEGSWSGVVLIQSAQGKTYPQDLTLQKINLVEGTFYVGVYLDLS
NNLYRIADVELGGVELLTQLPTEKQFTRSVANQWMDAAEPNISMVVAFHPNFSQVDDFEL
KSMLSEHLNKNKVAKFVGYLGSNHFVACLECDKVAGPSQIRMIHQTIRRFFATLNQDAGK
TIHNAIINGRVGVSVLGHDTHSPKKLVSHSVQAMLEQSSAQRGQITFYHGALHKEVLRRK
ELEEWAEKLIKSQAIEVYYQPIVDVKNWDIVKFEALSRFKDQNGKILNTQEMVMIAEDLD
LVSDLDWCVGKKALQDLKKIQERFGPNLGVTINRSLNTKLEVDEVLQSANSLVHQYASNP
ETVTIELTESAYFDSESRQSSLIRNIRRRGVSVAIDDFGTGYSSFAYLSDCNFDILKIDR
EFVKDLKEGSHKFHIVKMITQLAHTLNVQVVAEGVETRNELEVVCGLGVDYIQGYYFSKP
LPFDELESAWGYYEKLDSFLSSAGHARQVGILNMTQVHIPTLAPDDTLDKARSLFDSEQY
RLEVIPIVDRKECVGIVGREELNYHLSPTLGTKLETSKDQSISRKRLNQVMRTNVFSVSH
HSKVSKVSEIIKSGIKPPWLVVNDSGEYLGIVTNQDILEHFANG
Download sequence
Identical sequences F9T0N4
WP_004742978.1.24223 WP_004742978.1.29024 WP_004742978.1.35172

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