SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for WP_008772073.1.88644 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_008772073.1.88644
Domain Number 1 Region: 297-519
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.79e-36
Family ABC transporter ATPase domain-like 0.00057
Further Details:      
 
Domain Number 2 Region: 23-292
Classification Level Classification E-value
Superfamily DNA repair protein MutS, domain III 1.14e-17
Family DNA repair protein MutS, domain III 0.014
Further Details:      
 
Domain Number 3 Region: 746-820
Classification Level Classification E-value
Superfamily SMR domain-like 0.000000235
Family Smr domain 0.01
Further Details:      
 
Weak hits

Sequence:  WP_008772073.1.88644
Domain Number - Region: 546-671
Classification Level Classification E-value
Superfamily Apolipophorin-III 0.068
Family Apolipophorin-III 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_008772073.1.88644
Sequence length 822
Comment MULTISPECIES: endonuclease MutS2 [Bacteroidales]; AA=GCF_001405775.1; RF=na; TAX=823; STAX=823; NAME=Parabacteroides distasonis; strain=2789STDY5608822; AL=Contig; RT=Major
Sequence
MIYPQNFEQKTGFDKIRHLITEKCLSPLGEERVAEMGFSADFEVVSKRLEQTDEFIRILH
GDTEFPASYFFDVRYSLKRIRPEGTWLDERELFDLKRSLQTINDIVRFFKPMDDEEIKYP
ALTELAGDIFVFPQLIGKIDSILDKFGKVKDSASSTLSQIRREMTITMSGISRSLQSILR
AAQSDGVVDKDVTPTMRDGRLMIPVAPAFKRKIKGIVHDESASGKTVFIEPEVVVEANNR
IRELEGEERREIIKILTEFTNVIRPLAPDILQSYEFLADIDFIRAKALFAEQVKAIKPIV
EDKRQMDWVRAVHPLLFLSLQKQGKQVVPLDIELTEGKRILIISGPNAGGKSVCLKTVGL
LQYMLQCGLLIPLHERSRTGIFEHIFIDIGDEQSIENDLSTYSSHLTNMKYFVKNCNERT
IILIDEFGSGTEPQIGGAIAEALLDRFNRNHSFGVITTHYQNLKHFAEDTEGIVNGAMLY
DRHLMQPLFKLSIGNPGSSFAVEIARKIGLPEDVIADASANVGADYINMDKYLQDIVRDK
RYWESKRQNIRQQEKKLEDVTSRYEQDLEAVNKQRKEIIREAKAEAQRILAEANAKIENT
VREIKEAQAEKEQTKLARKALEEFKNSVMATEEEDDKIARKMAKLKERNERKKQKQKVTA
QPIFNKEVIEVGDNVRLKGQVSAGTVMELQGKQAVVAFGMIKSTVKLEQLEKVSKGQIKR
EIQKSTFVSSQTTDNMHEKKINFKQEIDVRGMRGDEALQSVTYFIDDAIQVGAGKVRILH
GTGTGILRQLIRDYLRTVPGVRRFQDEHVQFGGAGITVVEFD
Download sequence
Identical sequences A0A174H124 A6LBE0 C7X8I7 D0TBW1 D7ITZ2
435591.BDI_1243 WP_008772073.1.12386 WP_008772073.1.27322 WP_008772073.1.47855 WP_008772073.1.87144 WP_008772073.1.88644 WP_008772073.1.88798 gi|150007883|ref|YP_001302626.1|

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