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Domain assignment for WP_009886680.1.98901 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_009886680.1.98901
Domain Number 1 Region: 251-438,805-988,1019-1094
Classification Level Classification E-value
Superfamily PFL-like glycyl radical enzymes 4.94e-146
Family R1 subunit of ribonucleotide reductase, C-terminal domain 0.0018
Further Details:      
 
Domain Number 2 Region: 437-556,724-803
Classification Level Classification E-value
Superfamily Hedgehog/intein (Hint) domain 1.06e-36
Family Intein (protein splicing domain) 0.012
Further Details:      
 
Domain Number 3 Region: 635-753
Classification Level Classification E-value
Superfamily Homing endonucleases 0.00000000000000765
Family Intein endonuclease 0.036
Further Details:      
 
Domain Number 4 Region: 11-164
Classification Level Classification E-value
Superfamily R1 subunit of ribonucleotide reductase, N-terminal domain 0.00000000000419
Family R1 subunit of ribonucleotide reductase, N-terminal domain 0.0056
Further Details:      
 
Weak hits

Sequence:  WP_009886680.1.98901
Domain Number - Region: 220-250
Classification Level Classification E-value
Superfamily R1 subunit of ribonucleotide reductase, N-terminal domain 0.00654
Family R1 subunit of ribonucleotide reductase, N-terminal domain 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_009886680.1.98901
Sequence length 1136
Comment intein-containing adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [Ferroplasma acidarmanus]; AA=GCF_000152265.2; RF=representative genome; TAX=333146; STAX=97393; NAME=Ferroplasma acidarmanus fer1; strain=fer1; AL=Complete Genome; RT=Major
Sequence
MNKVLNTVIKRDGSSVPFDKKKIAMAIFKAMLSVKIGSMEEANKLADYVAQELETSSEVP
TVELIQDTVEKVLMTRRINDVSYIAAAKAYILYREKRNTIRQEKEFIGVKDDLKLSLNAV
KVLEARYLFKDSEGKIIETPKQMFHRVAVHLGIIQGLYDYISYRKTGKLNEKGTVYSGIT
KTQNEELERAFNELKKEKAIDGTYTEFIDFIKTKKNMINYWIEKFENMMIKLEYVPNSPT
LMNAGGPLGQLSACFVLPVDDSIDSIFDTLKATAEIHKSGGGTGFSFSRLRASDDIVAST
KGVASGPVSFMRIFDVTTDVIKQGGKRRGANMGILNYNHPNIMDFINSKDAENKILSNFN
ISVGVNDEFFEKLDNDENVDLINPRDGKVTGRVKATTLWNSIIDHAWLTADPGMIFLDEI
NKKNPVKNIGYIESTNPCVTGDTKIFTSEGVKKARQLYEEGNPLNVKIDGRFGGEFKPSS
NVIYTGFKDIYKIQTKEGFEIKVTGDHKIYSEKNGWTEALNLKENEKIRILNEGGSFGSS
GTLEEGRVLGWLVGDGHINNGNNNDRAVLNFYSQDRVFADTFRKYVNDIVRPATNNREYN
VGMVNIESRNCITIASERLKEFASEYDLIEEKLNVPDKVFAGSMELQRGFLQALFEADGT
VYSGQKSRHSVRLGSISLNLLKQVQMLLLNFGIYSRIYQNRKKAGMRMLPDSNREMRLYA
TQDFHELNISAENLIKYADSIGFISERKNSKLNGAVNSYKKAPVKPSWLARVDKIEYVGR
EDVYDLVEPSTHSFVANGIVVHNCGEQPLLPYESCNLGSINLAKFVEDGKFNYERYRETI
DVATRFLENVVDANKFPVESIKNMTRKTRKIGLGIMGFADALIMLGIPYNSNEALEFAEN
VMKTLNDESHMESQKLAAERGVFPGWYGSEYEEKGIKMRNSTTTTIAPTGTISIIAGCSS
SIEPLFALAFVRHVLNGQELLEVNPLLENALKSRNLWTQELMEKIAETGKLGNLDLPEDV
KNLFITAQEIDPDWHVLMQATFQKYCDSGVSKTINLPFDATREDIAKSYRLAKELHCKGI
TVYRDRSKSQQVLYAGTNQKKSDEEHKIDLTMKMPDKLLKLGATFDPACPTGKCDL
Download sequence
Identical sequences S0ANZ6
gi|518652012|ref|YP_008141532.1| WP_009886680.1.98901

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