SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_010316946.1.27540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_010316946.1.27540
Domain Number 1 Region: 425-669
Classification Level Classification E-value
Superfamily EAL domain-like 2.88e-67
Family EAL domain 0.0028
Further Details:      
 
Domain Number 2 Region: 125-241
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 6.66e-16
Family Flavin-binding PAS domain 0.046
Further Details:      
 
Domain Number 3 Region: 703-822
Classification Level Classification E-value
Superfamily CBS-domain pair 0.000000000000317
Family CBS-domain pair 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_010316946.1.27540
Sequence length 824
Comment histidine kinase [Vibrio ordalii]; AA=GCF_000257205.1; RF=na; TAX=990998; STAX=28174; NAME=Vibrio ordalii ATCC 33509; strain=ATCC 33509; AL=Contig; RT=Major
Sequence
MTQVNSQELREKAVFREPPVARYDAIDWSFNLTTSEFICDLKAPNTLLDSSVSIANIQEL
LLYMTPSKAAEMKRCFKYVIESGKSHALNCNLVILDQALTYVEIFIERTSLTQLQGTIRP
LLKLESLQEVAKLFEGVFENTHHGLILTDDQTRILACNHYFEQHSGFKQNELLGLQANIF
NAGKHSKEFFQSMWHDINTKDHWSGVILNRRASGLVAPQELTIQKIALQDGRVFFVGMTL
DLADNLHRVADTALGDIDLLTQLFTEQKFKTLLNTYCTEHSQDRTHIVLAFQPNFESERH
HTATLMLSSFLARSKEAKLVGYAGKDIYLVSLSCSECKKNTDFNLIQHAIRRFMKELKNE
SSSHLAVINGRIGVSVLGFDAKTPARMVTHAMQAMLEQHAGEARNISFYHSEIHQQVKRR
KNLEELVTKAIAEKDLEIHYQPIVDTKTWNIAKFEALCRFKPVPSLPFTTQEMINIAEEL
DLIADLDRCVSILSLQDLPKIKTLFGQGVGVTINRSFNTKMDATQILANTMEIIDRYTDT
PQSVTIELTESAYFDSQSHQVDALNALRSRGVTVAIDDFGTGYSSFTYLSDCNFDYLKID
REFVTDIQVNSNKYSIVKMITELSHTLGVKVVAEGVETEHEVWVLKSLGIDYMQGYIFSK
PRPLKELIHAKEYHSRFAYSRPKAEPEQQPNCLFNLFKRGKPHLDPSDPLSLVHQYFKAT
KVDSLPVVNQGACVGIVDIASLNLHLTPNMGTDLETTREAAVWRKPVNQIMKFHFTQLDA
YTELNQVVNLIEKGHDFPWVLVDNSRYKGLLTQGDVLRYLAESR
Download sequence
Identical sequences WP_010316946.1.27540

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]