SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_010906752.1.9947 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_010906752.1.9947
Domain Number 1 Region: 8-472
Classification Level Classification E-value
Superfamily Ribonuclease H-like 1.1e-127
Family DnaQ-like 3'-5' exonuclease 0.000000000162
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_010906752.1.9947
Sequence length 475
Comment exodeoxyribonuclease I [Pasteurella multocida]; AA=GCF_000412105.1; RF=na; TAX=1298928; STAX=747; NAME=Pasteurella multocida RIIF; strain=RIIF; AL=Contig; RT=Major
Sequence
MSTSPDFSFFIYDYESFGVDPASDRPAQFAGIRTDINFNIISDPVMFYCKQTNDYLPAPE
AVLVTGITPQECNEKGIPEPEFAERILQEFSRPNTCVMGFNNIRYDDEMTRYTFYRNFID
PYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDEEGMPSFRLEKLTKANGIEHSNAHD
AMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEVEKLIDTANLTPLVHVSGMLGNHRGN
TTWIVPLAWHPTNQNAVICCDLAANITDLLNKDANELRQNLYTPKAELIEKGILPVPLKL
VHINKCPILAPAKTLLPENAARLGIDRTFCLENLQRLKLSPPIRDKVTEIFNEERHFAPS
INVETELYNGFFDYNDKNNMAILRHLPEEKLAEHGLAFKDTRIPKLLFHYRARHYFNSLT
RAEQIQWQKYRHKKLDQVALQFEQSLQRLIAENSENPTNLALLQKVYEYGAKILA
Download sequence
Identical sequences Q9CN34
272843.PM0611 gi|15602476|ref|NP_245548.1| WP_010906752.1.19996 WP_010906752.1.66990 WP_010906752.1.9947

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]